Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC9.58□□□□□ -0.88
TOP2AP11388 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC9.58□□□□□ -0.88
TOP2AP11388 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC9.58□□□□□ -0.88
TOP2AP11388 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC9.58□□□□□ -0.88
TOP2AP11388 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC9.58□□□□□ -0.88
TOP2AP11388 AL513327.3-201ENST00000602618 469 ntBASIC9.58□□□□□ -0.88
TOP2AP11388 MAPK10-350ENST00000641777 965 ntBASIC9.58□□□□□ -0.88
TOP2AP11388 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC9.58□□□□□ -0.88
TOP2AP11388 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC9.58□□□□□ -0.88
TOP2AP11388 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
TOP2AP11388 LRRC37A9P-201ENST00000603850 5376 ntBASIC9.58□□□□□ -0.88
TOP2AP11388 HSPD1P8-201ENST00000400121 1658 ntBASIC9.58□□□□□ -0.88
TOP2AP11388 AC013268.3-201ENST00000262716 2324 ntBASIC9.58□□□□□ -0.88
TOP2AP11388 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
TOP2AP11388 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
TOP2AP11388 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TOP2AP11388 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC9.58□□□□□ -0.88
TOP2AP11388 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
TOP2AP11388 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TOP2AP11388 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
TOP2AP11388 RNU1-136P-201ENST00000384181 164 ntBASIC9.57□□□□□ -0.88
TOP2AP11388 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC9.57□□□□□ -0.88
TOP2AP11388 AC068138.1-201ENST00000412635 217 ntBASIC9.57□□□□□ -0.88
TOP2AP11388 DDX39BP1-205ENST00000422507 192 ntBASIC9.57□□□□□ -0.88
TOP2AP11388 HMGB1P32-201ENST00000425971 565 ntBASIC9.57□□□□□ -0.88
TOP2AP11388 AC104837.2-201ENST00000427236 424 ntBASIC9.57□□□□□ -0.88
TOP2AP11388 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC9.57□□□□□ -0.88
TOP2AP11388 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC9.57□□□□□ -0.88
TOP2AP11388 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC9.57□□□□□ -0.88
TOP2AP11388 AC007686.1-201ENST00000488511 463 ntBASIC9.57□□□□□ -0.88
TOP2AP11388 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC9.57□□□□□ -0.88
TOP2AP11388 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC9.57□□□□□ -0.88
TOP2AP11388 AP005403.1-201ENST00000579720 229 ntBASIC9.57□□□□□ -0.88
TOP2AP11388 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC9.57□□□□□ -0.88
TOP2AP11388 RN7SL356P-201ENST00000582228 248 ntBASIC9.57□□□□□ -0.88
TOP2AP11388 MIR4480-201ENST00000582492 71 ntBASIC9.57□□□□□ -0.88
TOP2AP11388 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC9.57□□□□□ -0.88
TOP2AP11388 AC009948.3-201ENST00000603415 1798 ntBASIC9.57□□□□□ -0.88
TOP2AP11388 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC9.57□□□□□ -0.88
TOP2AP11388 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
TOP2AP11388 MFSD4BP1-201ENST00000513330 1552 ntBASIC9.57□□□□□ -0.88
TOP2AP11388 Z82209.2-201ENST00000623410 2012 ntBASIC9.57□□□□□ -0.88
TOP2AP11388 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
TOP2AP11388 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
TOP2AP11388 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC9.57□□□□□ -0.88
TOP2AP11388 AL078621.3-201ENST00000623707 2042 ntBASIC9.56□□□□□ -0.88
TOP2AP11388 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TOP2AP11388 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC9.56□□□□□ -0.88
TOP2AP11388 FABP12P1-201ENST00000401911 322 ntBASIC9.56□□□□□ -0.88
TOP2AP11388 AL009179.1-201ENST00000406085 265 ntBASIC9.56□□□□□ -0.88
TOP2AP11388 RPL26P29-201ENST00000415623 438 ntBASIC9.56□□□□□ -0.88
TOP2AP11388 RNF10P1-201ENST00000418589 369 ntBASIC9.56□□□□□ -0.88
TOP2AP11388 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC9.56□□□□□ -0.88
TOP2AP11388 AC104634.1-201ENST00000452720 462 ntBASIC9.56□□□□□ -0.88
TOP2AP11388 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC9.56□□□□□ -0.88
TOP2AP11388 snoU109.5-201ENST00000516231 132 ntBASIC9.56□□□□□ -0.88
TOP2AP11388 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC9.56□□□□□ -0.88
TOP2AP11388 AP004607.2-201ENST00000533949 322 ntBASIC9.56□□□□□ -0.88
TOP2AP11388 H3F3BP2-201ENST00000583907 357 ntBASIC9.56□□□□□ -0.88
TOP2AP11388 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
TOP2AP11388 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC9.56□□□□□ -0.88
TOP2AP11388 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TOP2AP11388 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
TOP2AP11388 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TOP2AP11388 INTS6P1-201ENST00000504674 2530 ntBASIC9.56□□□□□ -0.88
TOP2AP11388 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
TOP2AP11388 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TOP2AP11388 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TOP2AP11388 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC9.56□□□□□ -0.88
TOP2AP11388 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
TOP2AP11388 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TOP2AP11388 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
TOP2AP11388 MRRF-207ENST00000373729 870 ntTSL 3 BASIC9.56□□□□□ -0.88
TOP2AP11388 CYB5AP4-201ENST00000396692 399 ntBASIC9.56□□□□□ -0.88
TOP2AP11388 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TOP2AP11388 RNGTTP1-201ENST00000420965 728 ntBASIC9.56□□□□□ -0.88
TOP2AP11388 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC9.56□□□□□ -0.88
TOP2AP11388 AC092647.2-201ENST00000452998 253 ntBASIC9.56□□□□□ -0.88
TOP2AP11388 RPS3AP53-201ENST00000454716 778 ntBASIC9.56□□□□□ -0.88
TOP2AP11388 EIF3KP3-201ENST00000514461 639 ntBASIC9.56□□□□□ -0.88
TOP2AP11388 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC9.56□□□□□ -0.88
TOP2AP11388 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC9.56□□□□□ -0.88
TOP2AP11388 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC9.56□□□□□ -0.88
TOP2AP11388 AL008638.3-201ENST00000623027 5182 ntBASIC9.56□□□□□ -0.88
TOP2AP11388 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC9.56□□□□□ -0.88
TOP2AP11388 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
TOP2AP11388 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC9.55□□□□□ -0.88
TOP2AP11388 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
TOP2AP11388 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TOP2AP11388 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TOP2AP11388 EEF1A1P33-201ENST00000554413 1362 ntBASIC9.55□□□□□ -0.88
TOP2AP11388 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC9.55□□□□□ -0.88
TOP2AP11388 AC022819.1-201ENST00000563495 3910 ntBASIC9.55□□□□□ -0.88
TOP2AP11388 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TOP2AP11388 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC9.55□□□□□ -0.88
TOP2AP11388 DNAJA1P4-201ENST00000406473 1166 ntBASIC9.55□□□□□ -0.88
TOP2AP11388 FAR2P2-201ENST00000413041 594 ntBASIC9.55□□□□□ -0.88
TOP2AP11388 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC9.55□□□□□ -0.88
TOP2AP11388 FAR2P4-202ENST00000425399 584 ntBASIC9.55□□□□□ -0.88
TOP2AP11388 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC9.55□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms