Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TPM1P09493 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TPM1P09493 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
TPM1P09493 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.24□□□□□ -1.41
TPM1P09493 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TPM1P09493 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TPM1P09493 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TPM1P09493 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
TPM1P09493 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.24□□□□□ -1.41
TPM1P09493 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TPM1P09493 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TPM1P09493 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.24□□□□□ -1.41
TPM1P09493 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TPM1P09493 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
TPM1P09493 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.24□□□□□ -1.41
TPM1P09493 RNA5SP110-201ENST00000362638 115 ntBASIC6.24□□□□□ -1.41
TPM1P09493 TRAV35-201ENST00000390462 330 ntBASIC6.24□□□□□ -1.41
TPM1P09493 RN7SKP108-201ENST00000411367 328 ntBASIC6.24□□□□□ -1.41
TPM1P09493 RPL35AP3-201ENST00000414680 288 ntBASIC6.24□□□□□ -1.41
TPM1P09493 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.24□□□□□ -1.41
TPM1P09493 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.24□□□□□ -1.41
TPM1P09493 HYALP1-201ENST00000417674 1279 ntBASIC6.24□□□□□ -1.41
TPM1P09493 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.24□□□□□ -1.41
TPM1P09493 AC099782.1-201ENST00000425889 474 ntBASIC6.24□□□□□ -1.41
TPM1P09493 AL161722.1-201ENST00000446972 1032 ntBASIC6.24□□□□□ -1.41
TPM1P09493 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.24□□□□□ -1.41
TPM1P09493 NXT1P1-201ENST00000458481 316 ntBASIC6.24□□□□□ -1.41
TPM1P09493 RPS4XP12-201ENST00000461747 709 ntBASIC6.24□□□□□ -1.41
TPM1P09493 RN7SL269P-201ENST00000467795 305 ntBASIC6.24□□□□□ -1.41
TPM1P09493 HMGN1P16-201ENST00000508308 283 ntBASIC6.24□□□□□ -1.41
TPM1P09493 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.24□□□□□ -1.41
TPM1P09493 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TPM1P09493 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.24□□□□□ -1.41
TPM1P09493 AC138517.1-201ENST00000515724 568 ntBASIC6.24□□□□□ -1.41
TPM1P09493 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.24□□□□□ -1.41
TPM1P09493 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.24□□□□□ -1.41
TPM1P09493 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.24□□□□□ -1.41
TPM1P09493 WBP1LP11-201ENST00000586141 328 ntBASIC6.24□□□□□ -1.41
TPM1P09493 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.24□□□□□ -1.41
TPM1P09493 MIR6885-201ENST00000612241 66 ntBASIC6.24□□□□□ -1.41
TPM1P09493 MIR6883-201ENST00000614952 78 ntBASIC6.24□□□□□ -1.41
TPM1P09493 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
TPM1P09493 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TPM1P09493 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TPM1P09493 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.24□□□□□ -1.41
TPM1P09493 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.23□□□□□ -1.41
TPM1P09493 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.23□□□□□ -1.41
TPM1P09493 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.23□□□□□ -1.41
TPM1P09493 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.23□□□□□ -1.41
TPM1P09493 AC011755.1-201ENST00000623763 2049 ntBASIC6.23□□□□□ -1.41
TPM1P09493 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TPM1P09493 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TPM1P09493 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TPM1P09493 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TPM1P09493 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
TPM1P09493 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
TPM1P09493 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
TPM1P09493 AL133260.1-201ENST00000405720 405 ntBASIC6.23□□□□□ -1.41
TPM1P09493 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TPM1P09493 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.23□□□□□ -1.41
TPM1P09493 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
TPM1P09493 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.23□□□□□ -1.41
TPM1P09493 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.23□□□□□ -1.41
TPM1P09493 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.23□□□□□ -1.41
TPM1P09493 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.23□□□□□ -1.41
TPM1P09493 AC069304.1-201ENST00000491593 704 ntBASIC6.23□□□□□ -1.41
TPM1P09493 RPS27P20-201ENST00000492051 246 ntBASIC6.23□□□□□ -1.41
TPM1P09493 DUTP1-201ENST00000493631 470 ntBASIC6.23□□□□□ -1.41
TPM1P09493 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.23□□□□□ -1.41
TPM1P09493 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.23□□□□□ -1.41
TPM1P09493 PRMT5P1-201ENST00000514351 598 ntBASIC6.23□□□□□ -1.41
TPM1P09493 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.23□□□□□ -1.41
TPM1P09493 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.23□□□□□ -1.41
TPM1P09493 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TPM1P09493 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.23□□□□□ -1.41
TPM1P09493 MIR4260-201ENST00000583107 67 ntBASIC6.23□□□□□ -1.41
TPM1P09493 MIR7853-201ENST00000584820 132 ntBASIC6.23□□□□□ -1.41
TPM1P09493 AL135999.3-201ENST00000610501 812 ntBASIC6.23□□□□□ -1.41
TPM1P09493 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.23□□□□□ -1.41
TPM1P09493 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.23□□□□□ -1.41
TPM1P09493 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
TPM1P09493 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TPM1P09493 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
TPM1P09493 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TPM1P09493 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
TPM1P09493 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TPM1P09493 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
TPM1P09493 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
TPM1P09493 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.22□□□□□ -1.41
TPM1P09493 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
TPM1P09493 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TPM1P09493 AC104964.3-201ENST00000606115 2860 ntBASIC6.22□□□□□ -1.41
TPM1P09493 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
TPM1P09493 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TPM1P09493 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
TPM1P09493 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TPM1P09493 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
TPM1P09493 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.22□□□□□ -1.41
TPM1P09493 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.22□□□□□ -1.41
TPM1P09493 AC096921.1-201ENST00000411661 375 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 647.4 ms