Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.05□□□□□ -1.44
APOEP02649 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
APOEP02649 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
APOEP02649 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.04□□□□□ -1.44
APOEP02649 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.04□□□□□ -1.44
APOEP02649 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
APOEP02649 FBXL21-201ENST00000297158 1305 ntBASIC6.04□□□□□ -1.44
APOEP02649 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
APOEP02649 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
APOEP02649 AC097063.1-201ENST00000426714 1797 ntBASIC6.04□□□□□ -1.44
APOEP02649 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
APOEP02649 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
APOEP02649 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
APOEP02649 MIR375-201ENST00000362103 64 ntBASIC6.04□□□□□ -1.44
APOEP02649 RNA5SP284-201ENST00000384547 118 ntBASIC6.04□□□□□ -1.44
APOEP02649 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.04□□□□□ -1.44
APOEP02649 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.04□□□□□ -1.44
APOEP02649 AC096775.1-201ENST00000437724 448 ntBASIC6.04□□□□□ -1.44
APOEP02649 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.04□□□□□ -1.44
APOEP02649 AC090602.1-201ENST00000469695 252 ntBASIC6.04□□□□□ -1.44
APOEP02649 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.04□□□□□ -1.44
APOEP02649 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.04□□□□□ -1.44
APOEP02649 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.04□□□□□ -1.44
APOEP02649 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.04□□□□□ -1.44
APOEP02649 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.04□□□□□ -1.44
APOEP02649 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
APOEP02649 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.04□□□□□ -1.44
APOEP02649 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.04□□□□□ -1.44
APOEP02649 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.04□□□□□ -1.44
APOEP02649 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
APOEP02649 AP004607.3-201ENST00000530354 3915 ntBASIC6.04□□□□□ -1.44
APOEP02649 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
APOEP02649 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
APOEP02649 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
APOEP02649 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
APOEP02649 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
APOEP02649 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.04□□□□□ -1.44
APOEP02649 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
APOEP02649 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
APOEP02649 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
APOEP02649 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
APOEP02649 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.03□□□□□ -1.44
APOEP02649 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
APOEP02649 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.03□□□□□ -1.44
APOEP02649 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
APOEP02649 AC139426.3-201ENST00000605648 2059 ntBASIC6.03□□□□□ -1.44
APOEP02649 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
APOEP02649 AC005261.2-201ENST00000593427 4258 ntBASIC6.03□□□□□ -1.44
APOEP02649 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
APOEP02649 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.03□□□□□ -1.44
APOEP02649 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
APOEP02649 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
APOEP02649 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
APOEP02649 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
APOEP02649 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
APOEP02649 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
APOEP02649 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
APOEP02649 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
APOEP02649 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.03□□□□□ -1.44
APOEP02649 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.03□□□□□ -1.44
APOEP02649 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.03□□□□□ -1.44
APOEP02649 RSU1P1-201ENST00000453416 441 ntBASIC6.03□□□□□ -1.44
APOEP02649 AC007998.1-201ENST00000474156 672 ntBASIC6.03□□□□□ -1.44
APOEP02649 RPL12P24-201ENST00000474907 486 ntBASIC6.03□□□□□ -1.44
APOEP02649 PSMA2P2-201ENST00000504319 686 ntBASIC6.03□□□□□ -1.44
APOEP02649 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.03□□□□□ -1.44
APOEP02649 UGT2A3P7-201ENST00000510485 734 ntBASIC6.03□□□□□ -1.44
APOEP02649 ASNSP4-201ENST00000511103 447 ntBASIC6.03□□□□□ -1.44
APOEP02649 SNORD46.2-201ENST00000516021 102 ntBASIC6.03□□□□□ -1.44
APOEP02649 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.03□□□□□ -1.44
APOEP02649 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.03□□□□□ -1.44
APOEP02649 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
APOEP02649 AL121594.2-201ENST00000541658 472 ntBASIC6.03□□□□□ -1.44
APOEP02649 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.03□□□□□ -1.44
APOEP02649 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.03□□□□□ -1.44
APOEP02649 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.03□□□□□ -1.44
APOEP02649 AP001496.3-201ENST00000580230 913 ntBASIC6.03□□□□□ -1.44
APOEP02649 AC060780.2-201ENST00000589047 198 ntBASIC6.03□□□□□ -1.44
APOEP02649 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.03□□□□□ -1.44
APOEP02649 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.03□□□□□ -1.44
APOEP02649 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
APOEP02649 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
APOEP02649 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.03□□□□□ -1.44
APOEP02649 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.03□□□□□ -1.44
APOEP02649 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
APOEP02649 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
APOEP02649 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
APOEP02649 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
APOEP02649 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
APOEP02649 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
APOEP02649 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.03□□□□□ -1.44
APOEP02649 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
APOEP02649 AL034546.1-201ENST00000623740 3693 ntBASIC6.03□□□□□ -1.44
APOEP02649 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
APOEP02649 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
APOEP02649 AC025470.1-201ENST00000510053 2032 ntBASIC6.03□□□□□ -1.44
APOEP02649 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
APOEP02649 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.44
APOEP02649 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
APOEP02649 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms