Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.46□□□□□ -1.54
SSX4O60224 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.46□□□□□ -1.54
SSX4O60224 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.46□□□□□ -1.54
SSX4O60224 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.46□□□□□ -1.54
SSX4O60224 MIR132-201ENST00000591554 101 ntBASIC5.46□□□□□ -1.54
SSX4O60224 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.46□□□□□ -1.54
SSX4O60224 AC004890.3-201ENST00000605566 1095 ntBASIC5.46□□□□□ -1.54
SSX4O60224 RNU6-84P-201ENST00000607737 102 ntBASIC5.46□□□□□ -1.54
SSX4O60224 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.46□□□□□ -1.54
SSX4O60224 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SSX4O60224 AL356094.1-201ENST00000624663 1212 ntBASIC5.46□□□□□ -1.54
SSX4O60224 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.46□□□□□ -1.54
SSX4O60224 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.46□□□□□ -1.54
SSX4O60224 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SSX4O60224 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SSX4O60224 AC008691.1-209ENST00000642094 814 ntBASIC5.46□□□□□ -1.54
SSX4O60224 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.46□□□□□ -1.54
SSX4O60224 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SSX4O60224 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SSX4O60224 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SSX4O60224 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SSX4O60224 MAPK10-328ENST00000641553 4009 ntBASIC5.46□□□□□ -1.54
SSX4O60224 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SSX4O60224 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SSX4O60224 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.46□□□□□ -1.54
SSX4O60224 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SSX4O60224 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.46□□□□□ -1.54
SSX4O60224 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.46□□□□□ -1.54
SSX4O60224 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SSX4O60224 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SSX4O60224 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSX4O60224 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSX4O60224 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSX4O60224 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSX4O60224 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSX4O60224 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SSX4O60224 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSX4O60224 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSX4O60224 AC114774.1-201ENST00000507410 1770 ntBASIC5.45□□□□□ -1.54
SSX4O60224 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSX4O60224 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
SSX4O60224 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SSX4O60224 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSX4O60224 COX6B1P3-201ENST00000312310 260 ntBASIC5.45□□□□□ -1.54
SSX4O60224 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SSX4O60224 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SSX4O60224 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SSX4O60224 RNA5SP478-201ENST00000364657 115 ntBASIC5.45□□□□□ -1.54
SSX4O60224 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
SSX4O60224 AMZ2P2-201ENST00000406819 1057 ntBASIC5.45□□□□□ -1.54
SSX4O60224 AL139805.1-201ENST00000407837 289 ntBASIC5.45□□□□□ -1.54
SSX4O60224 RN7SKP281-201ENST00000410472 352 ntBASIC5.45□□□□□ -1.54
SSX4O60224 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC5.45□□□□□ -1.54
SSX4O60224 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.45□□□□□ -1.54
SSX4O60224 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.45□□□□□ -1.54
SSX4O60224 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.45□□□□□ -1.54
SSX4O60224 MTCO1P45-201ENST00000431457 267 ntBASIC5.45□□□□□ -1.54
SSX4O60224 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.45□□□□□ -1.54
SSX4O60224 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.45□□□□□ -1.54
SSX4O60224 RPS15AP29-201ENST00000445539 400 ntBASIC5.45□□□□□ -1.54
SSX4O60224 RAB28P3-201ENST00000448325 597 ntBASIC5.45□□□□□ -1.54
SSX4O60224 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.45□□□□□ -1.54
SSX4O60224 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.45□□□□□ -1.54
SSX4O60224 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.45□□□□□ -1.54
SSX4O60224 RPL7L1P3-201ENST00000455249 689 ntBASIC5.45□□□□□ -1.54
SSX4O60224 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.45□□□□□ -1.54
SSX4O60224 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.45□□□□□ -1.54
SSX4O60224 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SSX4O60224 RPL12P30-201ENST00000488389 499 ntBASIC5.45□□□□□ -1.54
SSX4O60224 ASNSP4-201ENST00000511103 447 ntBASIC5.45□□□□□ -1.54
SSX4O60224 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.45□□□□□ -1.54
SSX4O60224 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.45□□□□□ -1.54
SSX4O60224 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.45□□□□□ -1.54
SSX4O60224 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.45□□□□□ -1.54
SSX4O60224 MIR3908-201ENST00000579798 126 ntBASIC5.45□□□□□ -1.54
SSX4O60224 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.45□□□□□ -1.54
SSX4O60224 AC092681.3-201ENST00000609463 678 ntBASIC5.45□□□□□ -1.54
SSX4O60224 AL365181.4-201ENST00000609800 547 ntBASIC5.45□□□□□ -1.54
SSX4O60224 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
SSX4O60224 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SSX4O60224 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SSX4O60224 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SSX4O60224 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSX4O60224 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SSX4O60224 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.45□□□□□ -1.54
SSX4O60224 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SSX4O60224 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSX4O60224 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSX4O60224 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.45□□□□□ -1.54
SSX4O60224 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SSX4O60224 AC119674.1-202ENST00000641333 1860 ntBASIC5.45□□□□□ -1.54
SSX4O60224 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SSX4O60224 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.45□□□□□ -1.54
SSX4O60224 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SSX4O60224 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SSX4O60224 MTND4P21-201ENST00000453886 1357 ntBASIC5.44□□□□□ -1.54
SSX4O60224 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
SSX4O60224 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SSX4O60224 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.44□□□□□ -1.54
SSX4O60224 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms