Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AP000473.2-201ENST00000602659 1537 ntBASIC5.61□□□□□ -1.51
TRIM49D1C9J1S8 AC124916.2-201ENST00000604416 224 ntBASIC5.61□□□□□ -1.51
TRIM49D1C9J1S8 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM49D1C9J1S8 OR8A1-204ENST00000642111 1145 ntBASIC5.61□□□□□ -1.51
TRIM49D1C9J1S8 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM49D1C9J1S8 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
TRIM49D1C9J1S8 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM49D1C9J1S8 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM49D1C9J1S8 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM49D1C9J1S8 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 AC002525.1-201ENST00000624392 1622 ntBASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 GAPDHP24-201ENST00000328713 983 ntBASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 RPSAP35-201ENST00000413753 818 ntBASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 HYALP1-201ENST00000417674 1279 ntBASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 BX284632.2-201ENST00000421091 399 ntBASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 RIMKLBP2-201ENST00000424737 654 ntBASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 AL136231.1-201ENST00000429407 730 ntBASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 RPL7P56-201ENST00000429441 717 ntBASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 ATP5LP2-201ENST00000440646 311 ntBASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 AL512605.1-202ENST00000441919 381 ntBASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 AL359955.2-201ENST00000445380 353 ntBASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 IGBP1P3-201ENST00000447449 1000 ntBASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 AL596266.1-201ENST00000448132 400 ntBASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 CBX1P2-201ENST00000453841 458 ntBASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 AC098818.1-201ENST00000478593 252 ntBASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 RN7SL193P-201ENST00000491708 276 ntBASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 AC009120.1-201ENST00000493458 473 ntBASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 SCARNA18.1-201ENST00000516330 83 ntBASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 RNA5SP340-201ENST00000517132 107 ntBASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 AC021678.3-201ENST00000517893 476 ntBASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 AP003396.4-201ENST00000527574 265 ntBASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 TRIM51DP-201ENST00000529746 596 ntBASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 HSPE1P2-201ENST00000554777 306 ntBASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 AC009237.13-201ENST00000603193 276 ntBASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 MIR6793-201ENST00000612376 63 ntBASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM49D1C9J1S8 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 RN7SKP250-201ENST00000363924 321 ntBASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 AL590399.4-201ENST00000436561 601 ntBASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 VN1R110P-201ENST00000438988 971 ntBASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 SETP4-201ENST00000455717 868 ntBASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 CST12P-201ENST00000457644 362 ntBASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 RPSAP37-201ENST00000470913 821 ntBASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 DEFB109A-201ENST00000482450 265 ntBASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 AC021106.1-201ENST00000509020 1058 ntBASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 AC021193.1-201ENST00000511607 420 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 304 ms