Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 SNORA70.20-201ENST00000516848 126 ntBASIC5.46□□□□□ -1.54
LRIT2A6NDA9 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LRIT2A6NDA9 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
LRIT2A6NDA9 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.46□□□□□ -1.54
LRIT2A6NDA9 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LRIT2A6NDA9 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.46□□□□□ -1.54
LRIT2A6NDA9 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.46□□□□□ -1.54
LRIT2A6NDA9 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.46□□□□□ -1.54
LRIT2A6NDA9 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.46□□□□□ -1.54
LRIT2A6NDA9 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.46□□□□□ -1.54
LRIT2A6NDA9 RN7SL544P-201ENST00000617232 284 ntBASIC5.46□□□□□ -1.54
LRIT2A6NDA9 RN7SL763P-201ENST00000620922 284 ntBASIC5.46□□□□□ -1.54
LRIT2A6NDA9 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LRIT2A6NDA9 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
LRIT2A6NDA9 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LRIT2A6NDA9 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
LRIT2A6NDA9 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
LRIT2A6NDA9 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
LRIT2A6NDA9 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
LRIT2A6NDA9 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.46□□□□□ -1.54
LRIT2A6NDA9 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
LRIT2A6NDA9 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LRIT2A6NDA9 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.46□□□□□ -1.54
LRIT2A6NDA9 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
LRIT2A6NDA9 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 AC006600.2-201ENST00000624834 2506 ntBASIC5.45□□□□□ -1.54
LRIT2A6NDA9 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.45□□□□□ -1.54
LRIT2A6NDA9 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 MIR375-201ENST00000362103 64 ntBASIC5.45□□□□□ -1.54
LRIT2A6NDA9 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 RNU1-136P-201ENST00000384181 164 ntBASIC5.45□□□□□ -1.54
LRIT2A6NDA9 MIR130A-201ENST00000385274 89 ntBASIC5.45□□□□□ -1.54
LRIT2A6NDA9 NPM1P37-201ENST00000403105 874 ntBASIC5.45□□□□□ -1.54
LRIT2A6NDA9 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 AL022331.1-201ENST00000429025 477 ntBASIC5.45□□□□□ -1.54
LRIT2A6NDA9 NFYAP1-201ENST00000431953 972 ntBASIC5.45□□□□□ -1.54
LRIT2A6NDA9 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 AC022215.1-201ENST00000481770 362 ntBASIC5.45□□□□□ -1.54
LRIT2A6NDA9 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 MTCO3P42-201ENST00000509488 518 ntBASIC5.45□□□□□ -1.54
LRIT2A6NDA9 MTCO3P39-201ENST00000514812 518 ntBASIC5.45□□□□□ -1.54
LRIT2A6NDA9 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 NDUFA5P11-201ENST00000567995 343 ntBASIC5.45□□□□□ -1.54
LRIT2A6NDA9 AC063977.5-201ENST00000601044 974 ntBASIC5.45□□□□□ -1.54
LRIT2A6NDA9 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.45□□□□□ -1.54
LRIT2A6NDA9 MIR6778-201ENST00000617912 73 ntBASIC5.45□□□□□ -1.54
LRIT2A6NDA9 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 AC239868.2-201ENST00000564237 4527 ntBASIC5.45□□□□□ -1.54
LRIT2A6NDA9 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 AC007842.1-201ENST00000597336 2039 ntBASIC5.45□□□□□ -1.54
LRIT2A6NDA9 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LRIT2A6NDA9 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
LRIT2A6NDA9 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
LRIT2A6NDA9 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LRIT2A6NDA9 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.44□□□□□ -1.54
LRIT2A6NDA9 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.44□□□□□ -1.54
LRIT2A6NDA9 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
LRIT2A6NDA9 AP005435.3-201ENST00000531260 3198 ntBASIC5.44□□□□□ -1.54
LRIT2A6NDA9 U3.10-201ENST00000364459 214 ntBASIC5.44□□□□□ -1.54
LRIT2A6NDA9 RN7SKP186-201ENST00000365371 303 ntBASIC5.44□□□□□ -1.54
LRIT2A6NDA9 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.44□□□□□ -1.54
LRIT2A6NDA9 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LRIT2A6NDA9 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.44□□□□□ -1.54
LRIT2A6NDA9 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.44□□□□□ -1.54
LRIT2A6NDA9 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.44□□□□□ -1.54
LRIT2A6NDA9 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.44□□□□□ -1.54
LRIT2A6NDA9 HMGB3P24-201ENST00000433260 622 ntBASIC5.44□□□□□ -1.54
LRIT2A6NDA9 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.44□□□□□ -1.54
LRIT2A6NDA9 AC242426.1-201ENST00000435270 960 ntBASIC5.44□□□□□ -1.54
LRIT2A6NDA9 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LRIT2A6NDA9 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.44□□□□□ -1.54
LRIT2A6NDA9 AL445665.1-202ENST00000452436 324 ntBASIC5.44□□□□□ -1.54
LRIT2A6NDA9 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.44□□□□□ -1.54
LRIT2A6NDA9 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
LRIT2A6NDA9 AC106872.5-201ENST00000508856 1416 ntBASIC5.44□□□□□ -1.54
LRIT2A6NDA9 AC021146.10-201ENST00000515628 706 ntBASIC5.44□□□□□ -1.54
LRIT2A6NDA9 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.44□□□□□ -1.54
LRIT2A6NDA9 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.44□□□□□ -1.54
LRIT2A6NDA9 AC139697.1-201ENST00000548429 745 ntBASIC5.44□□□□□ -1.54
LRIT2A6NDA9 AC079600.1-201ENST00000550326 297 ntBASIC5.44□□□□□ -1.54
LRIT2A6NDA9 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms