Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 AL355488.2-201ENST00000609909 2850 ntBASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 EPS15P1-202ENST00000459691 2071 ntBASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 RNU6-697P-201ENST00000363348 107 ntBASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 GEMIN2P1-201ENST00000454246 752 ntBASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 AC093166.4-201ENST00000457867 318 ntBASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 AC092905.1-201ENST00000467527 949 ntBASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 AC105384.2-201ENST00000508433 640 ntBASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 AC087360.1-201ENST00000518788 616 ntBASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 AP003033.2-201ENST00000528901 805 ntBASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 MTND5P21-201ENST00000531961 522 ntBASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 AC121758.1-202ENST00000556917 658 ntBASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 AC092332.1-201ENST00000563684 829 ntBASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 ZNF322P1-201ENST00000568013 1209 ntBASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 AL163952.1-202ENST00000569625 600 ntBASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 HIRAP1-201ENST00000605318 787 ntBASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 AC242628.1-201ENST00000606810 391 ntBASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 AC110792.4-201ENST00000609843 298 ntBASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 AC022306.3-201ENST00000619930 550 ntBASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 AL035661.1-201ENST00000620459 1144 ntBASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 AC022919.1-201ENST00000624979 626 ntBASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 PARP4P2-201ENST00000446672 3326 ntBASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 AL136520.1-201ENST00000600311 1322 ntBASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 CDY11P-201ENST00000447168 1651 ntBASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 CASC19-260ENST00000641828 2001 ntBASIC5.91□□□□□ -1.46
TCRBV7S3A2A0A539 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 RN7SKP171-201ENST00000364417 303 ntBASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 RNU11-201ENST00000387069 134 ntBASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 RBBP4P5-201ENST00000398583 1266 ntBASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 TRIM60P17-201ENST00000415181 719 ntBASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 AC099670.2-201ENST00000435130 321 ntBASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 PNKDP1-201ENST00000435914 430 ntBASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 RPL5P7-201ENST00000444235 813 ntBASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 AC097463.1-201ENST00000447288 481 ntBASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 EIF4E2P2-201ENST00000492033 736 ntBASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 AC018797.1-201ENST00000510791 255 ntBASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 RN7SKP238-201ENST00000516483 249 ntBASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 SNORA81.2-201ENST00000516868 170 ntBASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 AL360012.1-201ENST00000602813 131 ntBASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 AC097641.3-201ENST00000613523 464 ntBASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 AC015712.7-201ENST00000615211 635 ntBASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TCRBV7S3A2A0A539 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.9□□□□□ -1.47
TCRBV7S3A2A0A539 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
TCRBV7S3A2A0A539 PPBPP2-201ENST00000513150 1362 ntBASIC5.9□□□□□ -1.47
TCRBV7S3A2A0A539 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
TCRBV7S3A2A0A539 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
TCRBV7S3A2A0A539 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms