Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 CAP1P2-201ENST00000417455 1409 ntBASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 RNA5SP279-201ENST00000365513 117 ntBASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 SNRPEP6-201ENST00000407465 277 ntBASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 Z82198.3-201ENST00000421145 199 ntBASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 AC099782.1-201ENST00000425889 474 ntBASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 AC099677.3-201ENST00000427081 395 ntBASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 AC023271.1-201ENST00000445936 1090 ntBASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 FRG2FP-204ENST00000453982 852 ntBASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 CEACAMP11-201ENST00000455211 583 ntBASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 AL603882.1-201ENST00000463059 681 ntBASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 PFN1P6-201ENST00000476786 399 ntBASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 AC113367.2-201ENST00000505749 160 ntBASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 AC108103.1-201ENST00000511286 446 ntBASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 MAST4-IT1-201ENST00000514241 658 ntBASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 RNA5SP441-201ENST00000516809 88 ntBASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 AP001000.1-201ENST00000526843 742 ntBASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 OR4A43P-201ENST00000532938 908 ntBASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 AC090424.1-201ENST00000535243 736 ntBASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 AL163952.1-202ENST00000569625 600 ntBASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 AL078601.3-201ENST00000573303 535 ntBASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 AC015819.1-201ENST00000613588 663 ntBASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 AC073575.2-201ENST00000614212 627 ntBASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 AC107021.2-201ENST00000567714 2095 ntBASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF103-CHMP3A0A140T963 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 RNU1-146P-201ENST00000364015 165 ntBASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 RCC2P2-201ENST00000422174 918 ntBASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 CRIP1P1-201ENST00000427567 185 ntBASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 AL663074.2-201ENST00000440621 479 ntBASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 TRIM60P16-201ENST00000444048 694 ntBASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 RPL38P3-201ENST00000484463 213 ntBASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 OR7E157P-201ENST00000494376 911 ntBASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 OR7E99P-201ENST00000505750 922 ntBASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 AC007346.1-201ENST00000569208 867 ntBASIC5.59□□□□□ -1.51
RNF103-CHMP3A0A140T963 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms