Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AC092332.1-201ENST00000563684 829 ntBASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC139792.1-201ENST00000607051 647 ntBASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC005899.6-201ENST00000620729 297 ntBASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AL354854.1-201ENST00000455940 1363 ntBASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC068870.1-201ENST00000563737 2455 ntBASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC120036.2-201ENST00000509729 1474 ntBASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC006206.1-201ENST00000544842 3387 ntBASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AP001029.2-203ENST00000589795 4910 ntBASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AL121886.1-201ENST00000358609 435 ntBASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 SNORA51.9-201ENST00000384295 124 ntBASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 MIR551B-201ENST00000384984 96 ntBASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 MIR130B-202ENST00000385018 82 ntBASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AL357752.1-201ENST00000412817 349 ntBASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 RSL24D1P8-201ENST00000434442 492 ntBASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AL359265.1-201ENST00000440296 795 ntBASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 SNORD125-201ENST00000459538 96 ntBASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 RN7SL254P-201ENST00000460609 284 ntBASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC135999.1-201ENST00000478962 479 ntBASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 RPL29P23-201ENST00000486188 442 ntBASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 RN7SL362P-201ENST00000494228 267 ntBASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC105420.1-201ENST00000504389 582 ntBASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 RN7SKP35-201ENST00000517210 151 ntBASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC139365.2-201ENST00000517972 253 ntBASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC116917.1-201ENST00000520558 305 ntBASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 MTND2P17-201ENST00000550281 688 ntBASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC020915.5-201ENST00000596836 964 ntBASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AL021368.1-201ENST00000607490 540 ntBASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AL136131.3-201ENST00000607600 188 ntBASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 uc_338.29-201ENST00000615099 168 ntBASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AL138693.1-201ENST00000622219 129 ntBASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC016745.2-201ENST00000608834 3443 ntBASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRBV4-1A0A0J9YWV2 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRBV4-1A0A0J9YWV2 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.22□□□□□ -1.57
TRBV4-1A0A0J9YWV2 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.22□□□□□ -1.57
TRBV4-1A0A0J9YWV2 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.22□□□□□ -1.57
TRBV4-1A0A0J9YWV2 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRBV4-1A0A0J9YWV2 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.22□□□□□ -1.57
TRBV4-1A0A0J9YWV2 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRBV4-1A0A0J9YWV2 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRBV4-1A0A0J9YWV2 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRBV4-1A0A0J9YWV2 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRBV4-1A0A0J9YWV2 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRBV4-1A0A0J9YWV2 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.22□□□□□ -1.57
TRBV4-1A0A0J9YWV2 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AL136116.2-201ENST00000404020 785 ntBASIC5.22□□□□□ -1.57
TRBV4-1A0A0J9YWV2 GCNT1P4-201ENST00000404096 329 ntBASIC5.22□□□□□ -1.57
TRBV4-1A0A0J9YWV2 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.22□□□□□ -1.57
TRBV4-1A0A0J9YWV2 THEM7P-201ENST00000419556 672 ntBASIC5.22□□□□□ -1.57
TRBV4-1A0A0J9YWV2 MRPS21P2-201ENST00000424704 264 ntBASIC5.22□□□□□ -1.57
TRBV4-1A0A0J9YWV2 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.22□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC009784.1-201ENST00000426484 460 ntBASIC5.22□□□□□ -1.57
TRBV4-1A0A0J9YWV2 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.22□□□□□ -1.57
TRBV4-1A0A0J9YWV2 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.22□□□□□ -1.57
TRBV4-1A0A0J9YWV2 LINC02210-201ENST00000444561 288 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms