Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.87■□□□□ 0.77
NCKIPSDQ9NZQ3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NCKIPSDQ9NZQ3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.87■□□□□ 0.77
NCKIPSDQ9NZQ3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
NCKIPSDQ9NZQ3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
NCKIPSDQ9NZQ3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NCKIPSDQ9NZQ3 MIR4497-201ENST00000583208 89 ntBASIC19.87■□□□□ 0.77
NCKIPSDQ9NZQ3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NCKIPSDQ9NZQ3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
NCKIPSDQ9NZQ3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.87■□□□□ 0.77
NCKIPSDQ9NZQ3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.87■□□□□ 0.77
NCKIPSDQ9NZQ3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.87■□□□□ 0.77
NCKIPSDQ9NZQ3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.87■□□□□ 0.77
NCKIPSDQ9NZQ3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NCKIPSDQ9NZQ3 DPP3P2-201ENST00000416030 1696 ntBASIC19.87■□□□□ 0.77
NCKIPSDQ9NZQ3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NCKIPSDQ9NZQ3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.87■□□□□ 0.77
NCKIPSDQ9NZQ3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.87■□□□□ 0.77
NCKIPSDQ9NZQ3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NCKIPSDQ9NZQ3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.86■□□□□ 0.77
NCKIPSDQ9NZQ3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NCKIPSDQ9NZQ3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.86■□□□□ 0.77
NCKIPSDQ9NZQ3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NCKIPSDQ9NZQ3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.86■□□□□ 0.77
NCKIPSDQ9NZQ3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NCKIPSDQ9NZQ3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NCKIPSDQ9NZQ3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NCKIPSDQ9NZQ3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
NCKIPSDQ9NZQ3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NCKIPSDQ9NZQ3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NCKIPSDQ9NZQ3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NCKIPSDQ9NZQ3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
NCKIPSDQ9NZQ3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NCKIPSDQ9NZQ3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
NCKIPSDQ9NZQ3 AL390719.1-204ENST00000412397 1219 ntBASIC19.86■□□□□ 0.77
NCKIPSDQ9NZQ3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.86■□□□□ 0.77
NCKIPSDQ9NZQ3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NCKIPSDQ9NZQ3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NCKIPSDQ9NZQ3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.86■□□□□ 0.77
NCKIPSDQ9NZQ3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.86■□□□□ 0.77
NCKIPSDQ9NZQ3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.86■□□□□ 0.77
NCKIPSDQ9NZQ3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NCKIPSDQ9NZQ3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NCKIPSDQ9NZQ3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
NCKIPSDQ9NZQ3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NCKIPSDQ9NZQ3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.85■□□□□ 0.77
NCKIPSDQ9NZQ3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NCKIPSDQ9NZQ3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.85■□□□□ 0.77
NCKIPSDQ9NZQ3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.85■□□□□ 0.77
NCKIPSDQ9NZQ3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NCKIPSDQ9NZQ3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.85■□□□□ 0.77
NCKIPSDQ9NZQ3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NCKIPSDQ9NZQ3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
NCKIPSDQ9NZQ3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.85■□□□□ 0.77
NCKIPSDQ9NZQ3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
NCKIPSDQ9NZQ3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
NCKIPSDQ9NZQ3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.85■□□□□ 0.77
NCKIPSDQ9NZQ3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NCKIPSDQ9NZQ3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NCKIPSDQ9NZQ3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.85■□□□□ 0.77
NCKIPSDQ9NZQ3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.85■□□□□ 0.77
NCKIPSDQ9NZQ3 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.85■□□□□ 0.77
NCKIPSDQ9NZQ3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NCKIPSDQ9NZQ3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 AC005829.2-201ENST00000571422 1056 ntBASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCKIPSDQ9NZQ3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.83■□□□□ 0.77
NCKIPSDQ9NZQ3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
NCKIPSDQ9NZQ3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NCKIPSDQ9NZQ3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
NCKIPSDQ9NZQ3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms