Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LMO3Q8TAP4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LMO3Q8TAP4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.12■□□□□ 0.97
LMO3Q8TAP4 POM121L13P-201ENST00000422362 380 ntBASIC21.12■□□□□ 0.97
LMO3Q8TAP4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.12■□□□□ 0.97
LMO3Q8TAP4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.12■□□□□ 0.97
LMO3Q8TAP4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.12■□□□□ 0.97
LMO3Q8TAP4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.12■□□□□ 0.97
LMO3Q8TAP4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LMO3Q8TAP4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.12■□□□□ 0.97
LMO3Q8TAP4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LMO3Q8TAP4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.12■□□□□ 0.97
LMO3Q8TAP4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LMO3Q8TAP4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LMO3Q8TAP4 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.12■□□□□ 0.97
LMO3Q8TAP4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LMO3Q8TAP4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.11■□□□□ 0.97
LMO3Q8TAP4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.11■□□□□ 0.97
LMO3Q8TAP4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LMO3Q8TAP4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.11■□□□□ 0.97
LMO3Q8TAP4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
LMO3Q8TAP4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.11■□□□□ 0.97
LMO3Q8TAP4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
LMO3Q8TAP4 RNA5SP413-201ENST00000516373 109 ntBASIC21.11■□□□□ 0.97
LMO3Q8TAP4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.11■□□□□ 0.97
LMO3Q8TAP4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.11■□□□□ 0.97
LMO3Q8TAP4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
LMO3Q8TAP4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.11■□□□□ 0.97
LMO3Q8TAP4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.11■□□□□ 0.97
LMO3Q8TAP4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
LMO3Q8TAP4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
LMO3Q8TAP4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LMO3Q8TAP4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LMO3Q8TAP4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LMO3Q8TAP4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
LMO3Q8TAP4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LMO3Q8TAP4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LMO3Q8TAP4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LMO3Q8TAP4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LMO3Q8TAP4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LMO3Q8TAP4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LMO3Q8TAP4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
LMO3Q8TAP4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
LMO3Q8TAP4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LMO3Q8TAP4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.1■□□□□ 0.97
LMO3Q8TAP4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LMO3Q8TAP4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.1■□□□□ 0.97
LMO3Q8TAP4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LMO3Q8TAP4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LMO3Q8TAP4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LMO3Q8TAP4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LMO3Q8TAP4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LMO3Q8TAP4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
LMO3Q8TAP4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LMO3Q8TAP4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
LMO3Q8TAP4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.1■□□□□ 0.97
LMO3Q8TAP4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LMO3Q8TAP4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LMO3Q8TAP4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.09■□□□□ 0.97
LMO3Q8TAP4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LMO3Q8TAP4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.09■□□□□ 0.97
LMO3Q8TAP4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LMO3Q8TAP4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
LMO3Q8TAP4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LMO3Q8TAP4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.09■□□□□ 0.97
LMO3Q8TAP4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
LMO3Q8TAP4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.09■□□□□ 0.97
LMO3Q8TAP4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
LMO3Q8TAP4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.09■□□□□ 0.97
LMO3Q8TAP4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.09■□□□□ 0.97
LMO3Q8TAP4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.09■□□□□ 0.97
LMO3Q8TAP4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LMO3Q8TAP4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.09■□□□□ 0.97
LMO3Q8TAP4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LMO3Q8TAP4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.09■□□□□ 0.97
LMO3Q8TAP4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
LMO3Q8TAP4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LMO3Q8TAP4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LMO3Q8TAP4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
LMO3Q8TAP4 AP006587.1-201ENST00000534129 1502 ntBASIC21.09■□□□□ 0.97
LMO3Q8TAP4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
LMO3Q8TAP4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LMO3Q8TAP4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.08■□□□□ 0.97
LMO3Q8TAP4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LMO3Q8TAP4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LMO3Q8TAP4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
LMO3Q8TAP4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
LMO3Q8TAP4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LMO3Q8TAP4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LMO3Q8TAP4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LMO3Q8TAP4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LMO3Q8TAP4 AC026366.1-201ENST00000488803 879 ntBASIC21.08■□□□□ 0.97
LMO3Q8TAP4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LMO3Q8TAP4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.08■□□□□ 0.97
LMO3Q8TAP4 AP003097.1-201ENST00000530657 1135 ntBASIC21.08■□□□□ 0.97
LMO3Q8TAP4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LMO3Q8TAP4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
LMO3Q8TAP4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LMO3Q8TAP4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LMO3Q8TAP4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms