Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMC4P56277 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CMC4P56277 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMC4P56277 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMC4P56277 MOK-225ENST00000522867 1883 ntTSL 5 BASIC14.66□□□□□ -0.06
CMC4P56277 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMC4P56277 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMC4P56277 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMC4P56277 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMC4P56277 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMC4P56277 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.66□□□□□ -0.06
CMC4P56277 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMC4P56277 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMC4P56277 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CMC4P56277 KRASP1-201ENST00000407852 552 ntBASIC14.66□□□□□ -0.06
CMC4P56277 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC14.66□□□□□ -0.06
CMC4P56277 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.66□□□□□ -0.06
CMC4P56277 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC14.66□□□□□ -0.06
CMC4P56277 KRT16P5-201ENST00000455284 522 ntBASIC14.66□□□□□ -0.06
CMC4P56277 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC14.66□□□□□ -0.06
CMC4P56277 RPPH1-201ENST00000516869 333 ntBASIC14.66□□□□□ -0.06
CMC4P56277 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.66□□□□□ -0.06
CMC4P56277 AP001412.1-201ENST00000608405 714 ntBASIC14.66□□□□□ -0.06
CMC4P56277 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMC4P56277 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CMC4P56277 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CMC4P56277 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CMC4P56277 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMC4P56277 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMC4P56277 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMC4P56277 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMC4P56277 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMC4P56277 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
CMC4P56277 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CMC4P56277 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
CMC4P56277 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CMC4P56277 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC14.65□□□□□ -0.06
CMC4P56277 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CMC4P56277 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CMC4P56277 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
CMC4P56277 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CMC4P56277 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CMC4P56277 AL353807.1-201ENST00000427475 662 ntBASIC14.65□□□□□ -0.06
CMC4P56277 NME1-207ENST00000480143 964 ntTSL 2 BASIC14.65□□□□□ -0.06
CMC4P56277 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CMC4P56277 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CMC4P56277 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC14.65□□□□□ -0.06
CMC4P56277 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CMC4P56277 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CMC4P56277 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.65□□□□□ -0.06
CMC4P56277 AL023875.1-201ENST00000640777 796 ntBASIC14.65□□□□□ -0.06
CMC4P56277 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CMC4P56277 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CMC4P56277 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CMC4P56277 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CMC4P56277 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CMC4P56277 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CMC4P56277 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CMC4P56277 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
CMC4P56277 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CMC4P56277 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.07
CMC4P56277 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMC4P56277 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMC4P56277 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMC4P56277 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC14.64□□□□□ -0.07
CMC4P56277 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMC4P56277 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.64□□□□□ -0.07
CMC4P56277 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMC4P56277 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CMC4P56277 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMC4P56277 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC14.64□□□□□ -0.07
CMC4P56277 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMC4P56277 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CMC4P56277 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.64□□□□□ -0.07
CMC4P56277 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC14.64□□□□□ -0.07
CMC4P56277 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.64□□□□□ -0.07
CMC4P56277 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.64□□□□□ -0.07
CMC4P56277 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CMC4P56277 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMC4P56277 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.64□□□□□ -0.07
CMC4P56277 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.64□□□□□ -0.07
CMC4P56277 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.64□□□□□ -0.07
CMC4P56277 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CMC4P56277 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMC4P56277 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMC4P56277 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMC4P56277 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMC4P56277 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMC4P56277 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CMC4P56277 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CMC4P56277 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CMC4P56277 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMC4P56277 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMC4P56277 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMC4P56277 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.63□□□□□ -0.07
CMC4P56277 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CMC4P56277 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMC4P56277 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CMC4P56277 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CMC4P56277 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms