Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNYL3P0C7X3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNYL3P0C7X3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.97■□□□□ 0.63
CCNYL3P0C7X3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNYL3P0C7X3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCNYL3P0C7X3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.97■□□□□ 0.63
CCNYL3P0C7X3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.97■□□□□ 0.63
CCNYL3P0C7X3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.97■□□□□ 0.63
CCNYL3P0C7X3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCNYL3P0C7X3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.97■□□□□ 0.63
CCNYL3P0C7X3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.97■□□□□ 0.63
CCNYL3P0C7X3 AC020907.5-201ENST00000624372 1936 ntBASIC18.97■□□□□ 0.63
CCNYL3P0C7X3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNYL3P0C7X3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCNYL3P0C7X3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCNYL3P0C7X3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.97■□□□□ 0.63
CCNYL3P0C7X3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCNYL3P0C7X3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.97■□□□□ 0.63
CCNYL3P0C7X3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCNYL3P0C7X3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCNYL3P0C7X3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCNYL3P0C7X3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNYL3P0C7X3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CCNYL3P0C7X3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNYL3P0C7X3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNYL3P0C7X3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNYL3P0C7X3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCNYL3P0C7X3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNYL3P0C7X3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCNYL3P0C7X3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCNYL3P0C7X3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCNYL3P0C7X3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.96■□□□□ 0.63
CCNYL3P0C7X3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.96■□□□□ 0.63
CCNYL3P0C7X3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.96■□□□□ 0.63
CCNYL3P0C7X3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.96■□□□□ 0.63
CCNYL3P0C7X3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNYL3P0C7X3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.96■□□□□ 0.63
CCNYL3P0C7X3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.96■□□□□ 0.63
CCNYL3P0C7X3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.96■□□□□ 0.63
CCNYL3P0C7X3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNYL3P0C7X3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.96■□□□□ 0.63
CCNYL3P0C7X3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.96■□□□□ 0.63
CCNYL3P0C7X3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNYL3P0C7X3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.96■□□□□ 0.63
CCNYL3P0C7X3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.96■□□□□ 0.63
CCNYL3P0C7X3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.96■□□□□ 0.63
CCNYL3P0C7X3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.95■□□□□ 0.62
CCNYL3P0C7X3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCNYL3P0C7X3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCNYL3P0C7X3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNYL3P0C7X3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNYL3P0C7X3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
CCNYL3P0C7X3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
CCNYL3P0C7X3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCNYL3P0C7X3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCNYL3P0C7X3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCNYL3P0C7X3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.95■□□□□ 0.62
CCNYL3P0C7X3 AC211429.1-201ENST00000415277 523 ntBASIC18.95■□□□□ 0.62
CCNYL3P0C7X3 ECEL1P3-201ENST00000427961 737 ntBASIC18.95■□□□□ 0.62
CCNYL3P0C7X3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.95■□□□□ 0.62
CCNYL3P0C7X3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCNYL3P0C7X3 LINC01023-201ENST00000606054 436 ntBASIC18.95■□□□□ 0.62
CCNYL3P0C7X3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNYL3P0C7X3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.95■□□□□ 0.62
CCNYL3P0C7X3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCNYL3P0C7X3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCNYL3P0C7X3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNYL3P0C7X3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNYL3P0C7X3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNYL3P0C7X3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CCNYL3P0C7X3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CCNYL3P0C7X3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 BX088651.1-201ENST00000540551 451 ntBASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 AL121906.2-201ENST00000621597 723 ntBASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNYL3P0C7X3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms