Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.79■■□□□ 1.08
CD4P01730 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CD4P01730 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
CD4P01730 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CD4P01730 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CD4P01730 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CD4P01730 AC007375.3-201ENST00000600936 2314 ntBASIC21.78■■□□□ 1.08
CD4P01730 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CD4P01730 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CD4P01730 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CD4P01730 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CD4P01730 UPK3BP1-201ENST00000428678 509 ntBASIC21.78■■□□□ 1.08
CD4P01730 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.78■■□□□ 1.08
CD4P01730 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CD4P01730 AP000692.2-201ENST00000608391 879 ntBASIC21.78■■□□□ 1.08
CD4P01730 AC091076.1-201ENST00000610741 619 ntBASIC21.78■■□□□ 1.08
CD4P01730 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CD4P01730 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CD4P01730 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
CD4P01730 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CD4P01730 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CD4P01730 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD4P01730 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD4P01730 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.77■■□□□ 1.08
CD4P01730 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.77■■□□□ 1.08
CD4P01730 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD4P01730 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD4P01730 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD4P01730 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CD4P01730 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CD4P01730 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.77■■□□□ 1.08
CD4P01730 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD4P01730 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD4P01730 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD4P01730 FAM8A6P-201ENST00000407496 1135 ntBASIC21.77■■□□□ 1.08
CD4P01730 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD4P01730 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.77■■□□□ 1.08
CD4P01730 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD4P01730 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CD4P01730 LINC01238-205ENST00000567549 1107 ntBASIC21.77■■□□□ 1.08
CD4P01730 AL138966.2-201ENST00000621997 464 ntBASIC21.77■■□□□ 1.08
CD4P01730 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CD4P01730 AC007225.1-201ENST00000566331 1836 ntBASIC21.77■■□□□ 1.08
CD4P01730 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.77■■□□□ 1.08
CD4P01730 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD4P01730 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD4P01730 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CD4P01730 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CD4P01730 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CD4P01730 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CD4P01730 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.76■■□□□ 1.07
CD4P01730 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CD4P01730 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CD4P01730 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CD4P01730 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.76■■□□□ 1.07
CD4P01730 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CD4P01730 HMGA1P5-201ENST00000412453 271 ntBASIC21.76■■□□□ 1.07
CD4P01730 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.76■■□□□ 1.07
CD4P01730 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.76■■□□□ 1.07
CD4P01730 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CD4P01730 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CD4P01730 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.76■■□□□ 1.07
CD4P01730 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CD4P01730 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CD4P01730 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.75■■□□□ 1.07
CD4P01730 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CD4P01730 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CD4P01730 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.75■■□□□ 1.07
CD4P01730 AL031133.1-201ENST00000406807 723 ntBASIC21.75■■□□□ 1.07
CD4P01730 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CD4P01730 TUBB8P6-201ENST00000436895 1288 ntBASIC21.75■■□□□ 1.07
CD4P01730 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.75■■□□□ 1.07
CD4P01730 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
CD4P01730 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
CD4P01730 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.75■■□□□ 1.07
CD4P01730 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CD4P01730 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CD4P01730 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CD4P01730 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CD4P01730 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CD4P01730 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.75■■□□□ 1.07
CD4P01730 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD4P01730 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD4P01730 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.74■■□□□ 1.07
CD4P01730 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD4P01730 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.74■■□□□ 1.07
CD4P01730 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD4P01730 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD4P01730 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CD4P01730 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.74■■□□□ 1.07
CD4P01730 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD4P01730 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.74■■□□□ 1.07
CD4P01730 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CD4P01730 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.74■■□□□ 1.07
CD4P01730 SLC25A1P4-201ENST00000567977 778 ntBASIC21.74■■□□□ 1.07
CD4P01730 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CD4P01730 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.74■■□□□ 1.07
CD4P01730 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD4P01730 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.74■■□□□ 1.07
CD4P01730 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms