Protein–RNA interactions for Protein: O70237

Gfi1b, Zinc finger protein Gfi-1b, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfi1bO70237 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gfi1bO70237 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gfi1bO70237 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Gfi1bO70237 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gfi1bO70237 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Gfi1bO70237 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gfi1bO70237 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Gfi1bO70237 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gfi1bO70237 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gfi1bO70237 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gfi1bO70237 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.17□□□□□ -0.14
Gfi1bO70237 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.17□□□□□ -0.14
Gfi1bO70237 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Gfi1bO70237 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Gfi1bO70237 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Gfi1bO70237 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gfi1bO70237 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Gfi1bO70237 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.16□□□□□ -0.14
Gfi1bO70237 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gfi1bO70237 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gfi1bO70237 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gfi1bO70237 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Gfi1bO70237 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Gfi1bO70237 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Gfi1bO70237 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gfi1bO70237 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gfi1bO70237 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gfi1bO70237 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gfi1bO70237 Gm13148-201ENSMUST00000118892 745 ntBASIC14.16□□□□□ -0.14
Gfi1bO70237 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.16□□□□□ -0.14
Gfi1bO70237 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Gfi1bO70237 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gfi1bO70237 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gfi1bO70237 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gfi1bO70237 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gfi1bO70237 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.16□□□□□ -0.14
Gfi1bO70237 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gfi1bO70237 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gfi1bO70237 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gfi1bO70237 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gfi1bO70237 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gfi1bO70237 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gfi1bO70237 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gfi1bO70237 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Gfi1bO70237 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Gfi1bO70237 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gfi1bO70237 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gfi1bO70237 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gfi1bO70237 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Gfi1bO70237 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.15□□□□□ -0.14
Gfi1bO70237 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.15□□□□□ -0.14
Gfi1bO70237 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gfi1bO70237 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gfi1bO70237 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gfi1bO70237 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gfi1bO70237 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gfi1bO70237 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gfi1bO70237 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gfi1bO70237 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.14□□□□□ -0.15
Gfi1bO70237 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfi1bO70237 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Gfi1bO70237 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfi1bO70237 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfi1bO70237 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfi1bO70237 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfi1bO70237 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gfi1bO70237 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gfi1bO70237 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfi1bO70237 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gfi1bO70237 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.14□□□□□ -0.15
Gfi1bO70237 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfi1bO70237 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfi1bO70237 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gfi1bO70237 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfi1bO70237 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfi1bO70237 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfi1bO70237 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfi1bO70237 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.14□□□□□ -0.15
Gfi1bO70237 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gfi1bO70237 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gfi1bO70237 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gfi1bO70237 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfi1bO70237 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfi1bO70237 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfi1bO70237 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfi1bO70237 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Gfi1bO70237 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfi1bO70237 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfi1bO70237 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfi1bO70237 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gfi1bO70237 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gfi1bO70237 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfi1bO70237 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Gfi1bO70237 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.13□□□□□ -0.15
Gfi1bO70237 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.13□□□□□ -0.15
Gfi1bO70237 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfi1bO70237 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfi1bO70237 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfi1bO70237 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gfi1bO70237 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms