Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
TNRC18O15417 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TNRC18O15417 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC21.61■■□□□ 1.05
TNRC18O15417 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
TNRC18O15417 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.61■■□□□ 1.05
TNRC18O15417 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TNRC18O15417 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TNRC18O15417 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TNRC18O15417 AL121772.3-201ENST00000610840 674 ntBASIC21.61■■□□□ 1.05
TNRC18O15417 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TNRC18O15417 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TNRC18O15417 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.61■■□□□ 1.05
TNRC18O15417 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.6■■□□□ 1.05
TNRC18O15417 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC21.6■■□□□ 1.05
TNRC18O15417 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
TNRC18O15417 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
TNRC18O15417 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
TNRC18O15417 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
TNRC18O15417 KRT8P36-201ENST00000489121 1440 ntBASIC21.6■■□□□ 1.05
TNRC18O15417 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.6■■□□□ 1.05
TNRC18O15417 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC21.6■■□□□ 1.05
TNRC18O15417 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.6■■□□□ 1.05
TNRC18O15417 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TNRC18O15417 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TNRC18O15417 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.6■■□□□ 1.05
TNRC18O15417 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
TNRC18O15417 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.6■■□□□ 1.05
TNRC18O15417 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC21.6■■□□□ 1.05
TNRC18O15417 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNRC18O15417 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNRC18O15417 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
TNRC18O15417 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TNRC18O15417 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC21.59■■□□□ 1.05
TNRC18O15417 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.59■■□□□ 1.05
TNRC18O15417 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TNRC18O15417 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.59■■□□□ 1.05
TNRC18O15417 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.59■■□□□ 1.05
TNRC18O15417 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
TNRC18O15417 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.59■■□□□ 1.05
TNRC18O15417 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TNRC18O15417 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TNRC18O15417 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TNRC18O15417 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TNRC18O15417 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
TNRC18O15417 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TNRC18O15417 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC21.58■■□□□ 1.05
TNRC18O15417 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TNRC18O15417 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.58■■□□□ 1.05
TNRC18O15417 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
TNRC18O15417 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.58■■□□□ 1.04
TNRC18O15417 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
TNRC18O15417 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.58■■□□□ 1.04
TNRC18O15417 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC21.58■■□□□ 1.04
TNRC18O15417 REXO1L6P-202ENST00000619970 1078 ntBASIC21.58■■□□□ 1.04
TNRC18O15417 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC21.58■■□□□ 1.04
TNRC18O15417 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.04
TNRC18O15417 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
TNRC18O15417 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TNRC18O15417 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.57■■□□□ 1.04
TNRC18O15417 PIN1-206ENST00000587625 878 ntTSL 2 BASIC21.57■■□□□ 1.04
TNRC18O15417 AL353801.3-201ENST00000609898 542 ntBASIC21.57■■□□□ 1.04
TNRC18O15417 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TNRC18O15417 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC21.57■■□□□ 1.04
TNRC18O15417 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TNRC18O15417 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TNRC18O15417 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TNRC18O15417 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TNRC18O15417 RPSAP43-201ENST00000402237 625 ntBASIC21.57■■□□□ 1.04
TNRC18O15417 FAM8A3P-201ENST00000427218 844 ntBASIC21.57■■□□□ 1.04
TNRC18O15417 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.57■■□□□ 1.04
TNRC18O15417 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TNRC18O15417 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
TNRC18O15417 AKR1C7P-201ENST00000305623 895 ntBASIC21.57■■□□□ 1.04
TNRC18O15417 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.57■■□□□ 1.04
TNRC18O15417 AC138894.3-201ENST00000603787 634 ntBASIC21.57■■□□□ 1.04
TNRC18O15417 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.57■■□□□ 1.04
TNRC18O15417 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.56■■□□□ 1.04
TNRC18O15417 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TNRC18O15417 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TNRC18O15417 PTBP1P-201ENST00000554374 1601 ntBASIC21.56■■□□□ 1.04
TNRC18O15417 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.56■■□□□ 1.04
TNRC18O15417 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TNRC18O15417 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TNRC18O15417 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC21.56■■□□□ 1.04
TNRC18O15417 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.56■■□□□ 1.04
TNRC18O15417 AP000867.3-201ENST00000524675 377 ntBASIC21.56■■□□□ 1.04
TNRC18O15417 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TNRC18O15417 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
TNRC18O15417 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.56■■□□□ 1.04
TNRC18O15417 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TNRC18O15417 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TNRC18O15417 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TNRC18O15417 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TNRC18O15417 LINC00167-201ENST00000530583 1419 ntBASIC21.55■■□□□ 1.04
TNRC18O15417 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNRC18O15417 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNRC18O15417 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC21.55■■□□□ 1.04
TNRC18O15417 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.55■■□□□ 1.04
TNRC18O15417 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.55■■□□□ 1.04
TNRC18O15417 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms