Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV25A0A0B4J276 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 AC098590.1-201ENST00000468126 897 ntBASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 AL135905.2-201ENST00000584934 1404 ntBASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV25A0A0B4J276 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 AL353807.1-201ENST00000427475 662 ntBASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 TUBB8P6-201ENST00000436895 1288 ntBASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV25A0A0B4J276 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV25A0A0B4J276 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV25A0A0B4J276 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC14.77□□□□□ -0.04
TRAV25A0A0B4J276 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
TRAV25A0A0B4J276 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV25A0A0B4J276 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV25A0A0B4J276 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
TRAV25A0A0B4J276 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.77□□□□□ -0.04
TRAV25A0A0B4J276 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TRAV25A0A0B4J276 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC14.77□□□□□ -0.04
TRAV25A0A0B4J276 TCF3P1-201ENST00000423021 1937 ntBASIC14.77□□□□□ -0.04
TRAV25A0A0B4J276 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TRAV25A0A0B4J276 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV25A0A0B4J276 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms