Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-3A0A075B6A4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-3A0A075B6A4 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Gm9207-201ENSMUST00000198773 1115 ntBASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-3A0A075B6A4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-3A0A075B6A4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-3A0A075B6A4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-3A0A075B6A4 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Trav12d-3A0A075B6A4 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-3A0A075B6A4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-3A0A075B6A4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-3A0A075B6A4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Trav12d-3A0A075B6A4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-3A0A075B6A4 Golgb1-201ENSMUST00000023534 498 ntBASIC12.66□□□□□ -0.38
Trav12d-3A0A075B6A4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-3A0A075B6A4 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-3A0A075B6A4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-3A0A075B6A4 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-3A0A075B6A4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.66□□□□□ -0.38
Trav12d-3A0A075B6A4 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-3A0A075B6A4 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-3A0A075B6A4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-3A0A075B6A4 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-3A0A075B6A4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav12d-3A0A075B6A4 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-3A0A075B6A4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-3A0A075B6A4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav12d-3A0A075B6A4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-3A0A075B6A4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-3A0A075B6A4 Gm12251-201ENSMUST00000117893 792 ntBASIC12.65□□□□□ -0.38
Trav12d-3A0A075B6A4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms