Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AL359265.1-201ENST00000440296 795 ntBASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 AL645936.1-201ENST00000441979 518 ntBASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 TRIM60P16-201ENST00000444048 694 ntBASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 RPL38P3-201ENST00000484463 213 ntBASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 RNA5SP434-201ENST00000516647 121 ntBASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 IGHV7-34-1-201ENST00000519200 350 ntBASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 AP001994.1-201ENST00000527539 826 ntBASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 AC135983.3-201ENST00000528049 1226 ntBASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 AC084851.2-201ENST00000530377 364 ntBASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 AP002004.1-206ENST00000532441 876 ntBASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 AC103855.4-201ENST00000533158 265 ntBASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 AL390726.5-202ENST00000564800 256 ntBASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 AP003108.4-201ENST00000623917 878 ntBASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 AC068213.1-201ENST00000625124 226 ntBASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 AC073488.3-201ENST00000631611 778 ntBASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.84□□□□□ -1.63
KCNIP3Q9Y2W7 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
KCNIP3Q9Y2W7 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
KCNIP3Q9Y2W7 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.84□□□□□ -1.64
KCNIP3Q9Y2W7 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.84□□□□□ -1.64
KCNIP3Q9Y2W7 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
KCNIP3Q9Y2W7 CDC27P2-201ENST00000425026 1922 ntBASIC4.84□□□□□ -1.64
KCNIP3Q9Y2W7 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 RBPJP7-201ENST00000442803 1447 ntBASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 SYT14P1-202ENST00000600441 1448 ntBASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 BTBD10P1-201ENST00000549824 1352 ntBASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 RN7SKP78-201ENST00000364711 318 ntBASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 AC003045.1-201ENST00000398779 713 ntBASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 GPS2P1-201ENST00000411761 986 ntBASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 AL139135.1-201ENST00000412675 209 ntBASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 AC094019.1-201ENST00000434678 472 ntBASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 SEPT14P12-201ENST00000442280 560 ntBASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 AC023141.8-201ENST00000442554 208 ntBASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 RPS10P18-201ENST00000442662 495 ntBASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 ZNF619P1-201ENST00000446539 752 ntBASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 COX4I1P2-201ENST00000447446 547 ntBASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 RPS7P11-201ENST00000484240 586 ntBASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 RPL5P33-201ENST00000487833 905 ntBASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 AC105391.1-201ENST00000503155 1045 ntBASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 AC008868.1-201ENST00000509786 737 ntBASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 AC095052.1-201ENST00000509955 863 ntBASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 AC021146.10-201ENST00000515628 706 ntBASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 AC110056.1-201ENST00000525759 911 ntBASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 OR9G2P-201ENST00000533326 880 ntBASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 AC037479.1-201ENST00000558361 625 ntBASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 AP005212.4-201ENST00000614206 710 ntBASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 AC073488.6-201ENST00000632293 754 ntBASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
KCNIP3Q9Y2W7 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms