Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC005244.1-201ENST00000582566 339 ntBASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 MIR4760-201ENST00000585040 80 ntBASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 AL391834.2-201ENST00000609982 546 ntBASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 AC006924.1-201ENST00000610750 559 ntBASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 AC103703.1-201ENST00000634783 663 ntBASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 AC123769.1-201ENST00000530992 3192 ntBASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 LINC01616-201ENST00000561816 2280 ntBASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.6□□□□□ -1.35
SSX2IPQ9Y2D8 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 RBMY1HP-201ENST00000382759 1389 ntBASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 RNU6-670P-201ENST00000364312 104 ntBASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 SNORA72.3-201ENST00000365074 132 ntBASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 MIR620-201ENST00000385232 95 ntBASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 EEF1B2P8-201ENST00000414101 671 ntBASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 RPL12P12-201ENST00000424633 501 ntBASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 AC011476.1-201ENST00000466725 307 ntBASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 RN7SL174P-201ENST00000475578 289 ntBASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 IGHV1-14-201ENST00000523391 241 ntBASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 MTND5P21-201ENST00000531961 522 ntBASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 AC125612.1-201ENST00000547580 377 ntBASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 LSM1P2-201ENST00000604911 322 ntBASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 AL591167.1-201ENST00000607321 456 ntBASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 AC108673.3-201ENST00000609183 335 ntBASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 MIR6793-201ENST00000612376 63 ntBASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 AC022960.3-201ENST00000619794 441 ntBASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 AC090772.4-201ENST00000623599 362 ntBASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SSX2IPQ9Y2D8 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.59□□□□□ -1.36
SSX2IPQ9Y2D8 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
SSX2IPQ9Y2D8 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
SSX2IPQ9Y2D8 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 AL132656.3-201ENST00000606384 1595 ntBASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 AC006213.6-201ENST00000623722 4179 ntBASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 AC079753.1-201ENST00000623243 3868 ntBASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 AL358178.1-201ENST00000407698 397 ntBASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 U3.43-201ENST00000410734 213 ntBASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 AL035660.1-201ENST00000422041 222 ntBASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 MTCYBP32-201ENST00000427945 1084 ntBASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 MTND6P12-201ENST00000428247 522 ntBASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 MTND4LP14-201ENST00000429447 288 ntBASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 RNF2P1-201ENST00000442955 1010 ntBASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 FTLP8-201ENST00000446770 267 ntBASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 SETP21-201ENST00000514799 892 ntBASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 Y_RNA.667-201ENST00000516212 107 ntBASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 RNU6-415P-201ENST00000516252 97 ntBASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.58□□□□□ -1.36
SSX2IPQ9Y2D8 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms