Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SHANK2Q9UPX8 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC8.35□□□□□ -1.07
SHANK2Q9UPX8 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC8.35□□□□□ -1.07
SHANK2Q9UPX8 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SHANK2Q9UPX8 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
SHANK2Q9UPX8 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
SHANK2Q9UPX8 AC006466.1-201ENST00000438721 289 ntBASIC8.35□□□□□ -1.07
SHANK2Q9UPX8 AC110775.1-201ENST00000513721 462 ntBASIC8.35□□□□□ -1.07
SHANK2Q9UPX8 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC8.35□□□□□ -1.07
SHANK2Q9UPX8 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC8.35□□□□□ -1.07
SHANK2Q9UPX8 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SHANK2Q9UPX8 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC8.35□□□□□ -1.07
SHANK2Q9UPX8 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SHANK2Q9UPX8 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
SHANK2Q9UPX8 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.07
SHANK2Q9UPX8 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 AC068769.1-201ENST00000474767 2426 ntBASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 AL662795.2-201ENST00000624252 3706 ntBASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 DHFRP1-201ENST00000579682 559 ntBASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 SAMMSON-209ENST00000641222 1100 ntBASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 MAPK10-350ENST00000641777 965 ntBASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
SHANK2Q9UPX8 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC8.34□□□□□ -1.08
SHANK2Q9UPX8 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 AP004607.3-201ENST00000530354 3915 ntBASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 RNA5SP326-201ENST00000363209 110 ntBASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 AC105399.1-202ENST00000447303 205 ntBASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 AC009963.2-201ENST00000453431 138 ntBASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 snoU109.5-201ENST00000516231 132 ntBASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 PMS2P3-207ENST00000529061 717 ntBASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 AC137768.1-201ENST00000549998 553 ntBASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 FAM25E-202ENST00000608562 189 ntBASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 AC091953.3-201ENST00000623220 236 ntBASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 AL596275.2-208ENST00000641192 594 ntBASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 AC104162.1-201ENST00000430831 2382 ntBASIC8.33□□□□□ -1.08
SHANK2Q9UPX8 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 CYB5AP4-201ENST00000396692 399 ntBASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 NANOGP9-201ENST00000439890 892 ntBASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 AL672138.1-201ENST00000450604 1015 ntBASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 MIR4480-201ENST00000582492 71 ntBASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms