Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.68□□□□□ -1.34
HDAC6Q9UBN7 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
HDAC6Q9UBN7 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
HDAC6Q9UBN7 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HDAC6Q9UBN7 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.68□□□□□ -1.34
HDAC6Q9UBN7 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.68□□□□□ -1.34
HDAC6Q9UBN7 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HDAC6Q9UBN7 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.68□□□□□ -1.34
HDAC6Q9UBN7 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HDAC6Q9UBN7 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 AL359091.1-201ENST00000449048 1734 ntBASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 SELENOWP1-201ENST00000322792 252 ntBASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 MARK2P12-201ENST00000420129 585 ntBASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 BX510359.3-201ENST00000422168 306 ntBASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 LYPLA1P1-201ENST00000434514 622 ntBASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 GAPDHP48-201ENST00000436626 961 ntBASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 RN7SL57P-201ENST00000493687 290 ntBASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 RNA5SP362-201ENST00000516048 118 ntBASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 RNU6-964P-201ENST00000516524 69 ntBASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 SNORA70.20-201ENST00000516848 126 ntBASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 CYCSP22-201ENST00000517555 339 ntBASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 AC022404.1-201ENST00000555320 273 ntBASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 AC010547.6-201ENST00000571789 193 ntBASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 MIR4489-201ENST00000578869 62 ntBASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 MIR3176-201ENST00000582210 90 ntBASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 AL049840.6-201ENST00000604583 345 ntBASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 FAM27E4-201ENST00000605259 342 ntBASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.67□□□□□ -1.34
HDAC6Q9UBN7 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 MTND3P20-201ENST00000407663 186 ntBASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 AC016027.5-201ENST00000427227 210 ntBASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 AC112187.1-201ENST00000455837 479 ntBASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 ATP5LP3-201ENST00000514223 304 ntBASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 AP000619.2-201ENST00000546014 969 ntBASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 AC020916.2-201ENST00000591242 360 ntBASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 AL713998.2-201ENST00000604538 1198 ntBASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 AC069234.4-201ENST00000621276 412 ntBASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 AC003992.1-201ENST00000635364 557 ntBASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 AL592429.1-201ENST00000403909 1473 ntBASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
HDAC6Q9UBN7 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.65□□□□□ -1.34
HDAC6Q9UBN7 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HDAC6Q9UBN7 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HDAC6Q9UBN7 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.65□□□□□ -1.34
HDAC6Q9UBN7 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
HDAC6Q9UBN7 AL161912.4-201ENST00000623889 2468 ntBASIC6.65□□□□□ -1.34
HDAC6Q9UBN7 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HDAC6Q9UBN7 BMS1P13-201ENST00000417301 885 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms