Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 SAMM50P1-201ENST00000455403 1399 ntBASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 AL442128.2-201ENST00000620246 1824 ntBASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 RNA5SP91-201ENST00000390902 119 ntBASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 VN1R12P-201ENST00000403778 876 ntBASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 RN7SKP279-201ENST00000411383 298 ntBASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 CRIP1P1-201ENST00000427567 185 ntBASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 LDHAP2-201ENST00000437325 985 ntBASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 DNAJA1P5-201ENST00000440278 943 ntBASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 snoU13.29-201ENST00000459370 104 ntBASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 ST13P12-201ENST00000508958 1094 ntBASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 AC139365.2-201ENST00000517972 253 ntBASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 SEC11B-201ENST00000518383 499 ntBASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 AP000648.1-201ENST00000529682 397 ntBASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 TOMM20P1-201ENST00000534518 427 ntBASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 AC090953.1-201ENST00000604305 1092 ntBASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 AL031601.1-201ENST00000605702 394 ntBASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 AL133481.2-203ENST00000607558 139 ntBASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 AC008833.1-201ENST00000611633 691 ntBASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 AL158062.1-201ENST00000619632 745 ntBASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 AC092070.2-203ENST00000598377 3644 ntBASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 AC011933.2-201ENST00000578539 2790 ntBASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 CCAT2-201ENST00000630920 1752 ntBASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
BLOC1S4Q9NUP1 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 AP004607.3-201ENST00000530354 3915 ntBASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 MSL3P1-202ENST00000440028 1468 ntBASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 PDZK1P1-202ENST00000425209 1350 ntBASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 LYPLA1P3-201ENST00000402650 695 ntBASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 OR2W4P-201ENST00000406496 926 ntBASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 AL357752.1-201ENST00000412817 349 ntBASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 NME1P1-201ENST00000420914 382 ntBASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 AC007064.3-201ENST00000422608 359 ntBASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 DEFA9P-201ENST00000433042 285 ntBASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 MTND6P32-201ENST00000457611 483 ntBASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 AC105918.1-201ENST00000474399 838 ntBASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 AC105384.2-201ENST00000508433 640 ntBASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 AC060775.1-201ENST00000518241 520 ntBASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 AL163952.1-202ENST00000569625 600 ntBASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 AL359742.1-201ENST00000622497 540 ntBASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
BLOC1S4Q9NUP1 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms