Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
BRF2Q9HAW0 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.78□□□□□ -1.48
BRF2Q9HAW0 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.78□□□□□ -1.48
BRF2Q9HAW0 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.78□□□□□ -1.48
BRF2Q9HAW0 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
BRF2Q9HAW0 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.78□□□□□ -1.48
BRF2Q9HAW0 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.78□□□□□ -1.48
BRF2Q9HAW0 AC093297.3-201ENST00000607056 2517 ntBASIC5.78□□□□□ -1.48
BRF2Q9HAW0 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
BRF2Q9HAW0 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
BRF2Q9HAW0 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
BRF2Q9HAW0 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.78□□□□□ -1.48
BRF2Q9HAW0 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.48
BRF2Q9HAW0 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.48
BRF2Q9HAW0 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 AL356057.1-202ENST00000402263 756 ntBASIC5.77□□□□□ -1.49
BRF2Q9HAW0 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 NMD3P2-201ENST00000421815 761 ntBASIC5.77□□□□□ -1.49
BRF2Q9HAW0 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 AC092865.3-201ENST00000425390 1026 ntBASIC5.77□□□□□ -1.49
BRF2Q9HAW0 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 RPS3AP38-201ENST00000435889 763 ntBASIC5.77□□□□□ -1.49
BRF2Q9HAW0 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 AC093166.3-201ENST00000448785 303 ntBASIC5.77□□□□□ -1.49
BRF2Q9HAW0 SDC4P-201ENST00000453285 601 ntBASIC5.77□□□□□ -1.49
BRF2Q9HAW0 AC093663.2-201ENST00000484625 313 ntBASIC5.77□□□□□ -1.49
BRF2Q9HAW0 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 RN7SL362P-201ENST00000494228 267 ntBASIC5.77□□□□□ -1.49
BRF2Q9HAW0 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 TOMM22P4-201ENST00000511318 336 ntBASIC5.77□□□□□ -1.49
BRF2Q9HAW0 snoU109.5-201ENST00000516231 132 ntBASIC5.77□□□□□ -1.49
BRF2Q9HAW0 AP001000.1-201ENST00000526843 742 ntBASIC5.77□□□□□ -1.49
BRF2Q9HAW0 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 MTND4LP25-201ENST00000570218 163 ntBASIC5.77□□□□□ -1.49
BRF2Q9HAW0 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 AL078601.3-201ENST00000573303 535 ntBASIC5.77□□□□□ -1.49
BRF2Q9HAW0 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 AP001496.3-201ENST00000580230 913 ntBASIC5.77□□□□□ -1.49
BRF2Q9HAW0 AC006115.2-201ENST00000596823 202 ntBASIC5.77□□□□□ -1.49
BRF2Q9HAW0 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 AC125494.2-201ENST00000602431 657 ntBASIC5.77□□□□□ -1.49
BRF2Q9HAW0 AC005014.3-201ENST00000605985 190 ntBASIC5.77□□□□□ -1.49
BRF2Q9HAW0 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 AC099654.15-201ENST00000639802 509 ntBASIC5.77□□□□□ -1.49
BRF2Q9HAW0 GTF2IP4-201ENST00000453092 2054 ntBASIC5.77□□□□□ -1.49
BRF2Q9HAW0 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 AC005224.3-201ENST00000584683 2140 ntBASIC5.77□□□□□ -1.49
BRF2Q9HAW0 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
BRF2Q9HAW0 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 AL161912.4-201ENST00000623889 2468 ntBASIC5.76□□□□□ -1.49
BRF2Q9HAW0 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 AC130304.1-201ENST00000622942 2385 ntBASIC5.76□□□□□ -1.49
BRF2Q9HAW0 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 RN7SKP128-201ENST00000364270 303 ntBASIC5.76□□□□□ -1.49
BRF2Q9HAW0 RN7SKP186-201ENST00000365371 303 ntBASIC5.76□□□□□ -1.49
BRF2Q9HAW0 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 RNU6-40P-201ENST00000384254 107 ntBASIC5.76□□□□□ -1.49
BRF2Q9HAW0 GAPDHP15-201ENST00000398586 975 ntBASIC5.76□□□□□ -1.49
BRF2Q9HAW0 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 RANP4-201ENST00000413361 655 ntBASIC5.76□□□□□ -1.49
BRF2Q9HAW0 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 AL035422.1-201ENST00000414193 397 ntBASIC5.76□□□□□ -1.49
BRF2Q9HAW0 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 263.3 ms