Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 LSM1P2-201ENST00000604911 322 ntBASIC5.84□□□□□ -1.47
LRRC40Q9H9A6 AL161912.3-201ENST00000605404 628 ntBASIC5.84□□□□□ -1.47
LRRC40Q9H9A6 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LRRC40Q9H9A6 AC015712.7-201ENST00000615211 635 ntBASIC5.84□□□□□ -1.47
LRRC40Q9H9A6 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LRRC40Q9H9A6 AL035661.1-201ENST00000620459 1144 ntBASIC5.84□□□□□ -1.47
LRRC40Q9H9A6 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
LRRC40Q9H9A6 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.84□□□□□ -1.47
LRRC40Q9H9A6 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.84□□□□□ -1.48
LRRC40Q9H9A6 CASC19-260ENST00000641828 2001 ntBASIC5.84□□□□□ -1.48
LRRC40Q9H9A6 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
LRRC40Q9H9A6 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
LRRC40Q9H9A6 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
LRRC40Q9H9A6 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AL929601.4-201ENST00000613011 1341 ntBASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 RNA5SP453-201ENST00000362503 119 ntBASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 RNA5SP500-201ENST00000364486 119 ntBASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AL357752.1-201ENST00000412817 349 ntBASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AC069154.1-201ENST00000432914 542 ntBASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 RPS7P6-201ENST00000485777 579 ntBASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AC012123.2-201ENST00000485809 248 ntBASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AC025458.1-201ENST00000506046 166 ntBASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AC026782.2-201ENST00000510845 636 ntBASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AC021146.10-201ENST00000515628 706 ntBASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 HMGN2P36-201ENST00000529541 409 ntBASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 FAM27E4-201ENST00000605259 342 ntBASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AL353729.2-201ENST00000605859 1249 ntBASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AC009779.8-202ENST00000607990 932 ntBASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 MIR7109-201ENST00000613748 65 ntBASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AC024884.1-201ENST00000620583 399 ntBASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AC129778.1-202ENST00000623812 261 ntBASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AC005618.4-201ENST00000625053 554 ntBASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AL591379.1-207ENST00000635982 261 ntBASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 AL161912.4-201ENST00000623889 2468 ntBASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LRRC40Q9H9A6 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 RNA5SP273-201ENST00000362484 113 ntBASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 RNA5SP477-201ENST00000362639 119 ntBASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 MIR130A-201ENST00000385274 89 ntBASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 MRPL53P1-201ENST00000414323 319 ntBASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 NIFKP3-201ENST00000417799 865 ntBASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 AK4P4-201ENST00000419465 646 ntBASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 NDUFS5P5-201ENST00000437256 321 ntBASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 Z83838.1-202ENST00000456225 839 ntBASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 DUTP1-201ENST00000493631 470 ntBASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 KATNBL1P4-201ENST00000503545 918 ntBASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 OR5H7P-201ENST00000514084 930 ntBASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 GAPDHP62-201ENST00000515313 990 ntBASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 Y_RNA.667-201ENST00000516212 107 ntBASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 AC139365.2-201ENST00000517972 253 ntBASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 AC027369.2-201ENST00000528030 440 ntBASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms