Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC079363.1-201ENST00000551366 1125 ntBASIC7.62□□□□□ -1.19
USB1Q9BQ65 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 GATA6-AS1-201ENST00000579431 481 ntTSL 3 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 AC005722.3-201ENST00000580884 446 ntTSL 3 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 AC010327.2-201ENST00000587647 488 ntBASIC7.62□□□□□ -1.19
USB1Q9BQ65 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 uc_338.2-201ENST00000612963 182 ntBASIC7.62□□□□□ -1.19
USB1Q9BQ65 AC084781.2-201ENST00000615568 161 ntBASIC7.62□□□□□ -1.19
USB1Q9BQ65 AC027139.2-201ENST00000615639 448 ntBASIC7.62□□□□□ -1.19
USB1Q9BQ65 AC245041.1-201ENST00000619523 826 ntTSL 3 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 AC119674.1-212ENST00000641155 993 ntBASIC7.62□□□□□ -1.19
USB1Q9BQ65 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 CSRNP3-203ENST00000409420 2545 ntTSL 5 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
USB1Q9BQ65 USP17L26-202ENST00000610514 1677 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 USP17L20-202ENST00000613757 1677 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 USP17L11-202ENST00000613973 1677 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 USP17L17-202ENST00000614762 1677 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 USP17L19-202ENST00000615989 1677 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 USP17L13-202ENST00000616303 1677 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 USP17L18-202ENST00000619296 1677 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 USP17L15-202ENST00000621432 1680 ntAPPRIS P2 TSL 5 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 USP17L25-202ENST00000621472 1677 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 USP17L22-202ENST00000622009 1677 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 USP17L24-202ENST00000622713 1677 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
USB1Q9BQ65 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
USB1Q9BQ65 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
USB1Q9BQ65 ZMYND8-213ENST00000461685 3567 ntAPPRIS P4 TSL 1 (best) BASIC7.62□□□□□ -1.19
USB1Q9BQ65 AL583836.1-201ENST00000464755 2395 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
USB1Q9BQ65 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
USB1Q9BQ65 OFD1P9Y-201ENST00000417699 1491 ntBASIC7.62□□□□□ -1.19
USB1Q9BQ65 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
USB1Q9BQ65 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
USB1Q9BQ65 EYA1-201ENST00000303824 3930 ntAPPRIS ALT1 TSL 2 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 LINC01260-201ENST00000415889 1416 ntTSL 5 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 RBPJP7-201ENST00000442803 1447 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 RBPJP5-201ENST00000449433 1447 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
USB1Q9BQ65 AC093909.5-201ENST00000621839 1799 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
USB1Q9BQ65 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
USB1Q9BQ65 AC026124.1-201ENST00000545709 3457 ntTSL 5 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 HCP5-201ENST00000414046 2658 ntTSL 4 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 SH3D19-204ENST00000427414 2656 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
USB1Q9BQ65 ANKRD62P1-201ENST00000434304 1623 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
USB1Q9BQ65 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 AC067945.1-201ENST00000342609 618 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 RNU6-777P-201ENST00000364265 104 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 GCG-201ENST00000375497 799 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 HYKK-202ENST00000408962 847 ntTSL 5 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 RN7SKP152-201ENST00000410444 315 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 AC005999.1-201ENST00000414409 588 ntTSL 4 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 NDUFB4P5-201ENST00000415445 361 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 ARHGEF7-IT1-201ENST00000423329 804 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
USB1Q9BQ65 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 CBX3P6-201ENST00000430257 527 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 AF274573.1-201ENST00000430535 494 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 AL354761.1-201ENST00000434190 526 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 AC004006.1-201ENST00000434994 377 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 CXCR2P1-202ENST00000443392 1074 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 IFNWP5-201ENST00000445100 588 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 AC096915.1-201ENST00000456185 512 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 IFNA22P-201ENST00000458710 570 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 RNU6-329P-201ENST00000459618 107 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 RN7SL77P-201ENST00000473332 294 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 AC073610.1-201ENST00000489971 396 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 AC108073.1-201ENST00000508231 674 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 AC015909.1-201ENST00000509943 839 ntTSL 3 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 RNU6-1003P-201ENST00000517099 105 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 RN7SKP256-201ENST00000517201 314 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 ATP6V1G1P2-201ENST00000522436 346 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 CHEK2P2-201ENST00000554701 672 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 LINC02134-201ENST00000562980 557 ntTSL 5 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 LINC01927-201ENST00000582231 712 ntTSL 3 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 MIR548Y-201ENST00000582739 110 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 MRPS5P4-201ENST00000592830 325 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 AC104785.1-201ENST00000603220 588 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 AC087763.1-201ENST00000603391 286 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 AC113143.2-201ENST00000603849 394 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 ACTR3BP1-201ENST00000605584 1247 ntBASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms