Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 AL080312.1-201ENST00000256654 824 ntBASIC4.29□□□□□ -1.72
AP1S3Q96PC3 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 MIR1266-201ENST00000408125 84 ntBASIC4.29□□□□□ -1.72
AP1S3Q96PC3 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 RNA5SP487-201ENST00000410186 122 ntBASIC4.29□□□□□ -1.72
AP1S3Q96PC3 RNU2-18P-201ENST00000411224 162 ntBASIC4.29□□□□□ -1.72
AP1S3Q96PC3 AL096829.1-201ENST00000413677 457 ntBASIC4.29□□□□□ -1.72
AP1S3Q96PC3 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 RNGTTP1-201ENST00000420965 728 ntBASIC4.29□□□□□ -1.72
AP1S3Q96PC3 CLCN3P1-201ENST00000423965 1017 ntBASIC4.29□□□□□ -1.72
AP1S3Q96PC3 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 AC094019.1-201ENST00000434678 472 ntBASIC4.29□□□□□ -1.72
AP1S3Q96PC3 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 AL354872.1-201ENST00000456361 967 ntBASIC4.29□□□□□ -1.72
AP1S3Q96PC3 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 TPT1P1-201ENST00000458495 518 ntBASIC4.29□□□□□ -1.72
AP1S3Q96PC3 RN7SL83P-201ENST00000468131 297 ntBASIC4.29□□□□□ -1.72
AP1S3Q96PC3 RPS7P11-201ENST00000484240 586 ntBASIC4.29□□□□□ -1.72
AP1S3Q96PC3 RPL38P3-201ENST00000484463 213 ntBASIC4.29□□□□□ -1.72
AP1S3Q96PC3 AL049874.2-201ENST00000492636 288 ntBASIC4.29□□□□□ -1.72
AP1S3Q96PC3 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 RFPL4AP5-201ENST00000514977 504 ntBASIC4.29□□□□□ -1.72
AP1S3Q96PC3 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 AC084851.2-201ENST00000530377 364 ntBASIC4.29□□□□□ -1.72
AP1S3Q96PC3 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 AC126615.2-201ENST00000553003 515 ntBASIC4.29□□□□□ -1.72
AP1S3Q96PC3 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 NMNAT1P5-201ENST00000559657 841 ntBASIC4.29□□□□□ -1.72
AP1S3Q96PC3 AC106730.2-201ENST00000566641 540 ntBASIC4.29□□□□□ -1.72
AP1S3Q96PC3 MED31-202ENST00000574128 619 ntTSL 3 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 OR7E19P-202ENST00000589942 844 ntBASIC4.29□□□□□ -1.72
AP1S3Q96PC3 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 NDUFB9P1-201ENST00000604683 510 ntBASIC4.29□□□□□ -1.72
AP1S3Q96PC3 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 AC022400.9-201ENST00000623633 273 ntBASIC4.29□□□□□ -1.72
AP1S3Q96PC3 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.29□□□□□ -1.72
AP1S3Q96PC3 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
AP1S3Q96PC3 AL731566.1-201ENST00000620490 1937 ntBASIC4.29□□□□□ -1.72
AP1S3Q96PC3 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 AP001642.1-201ENST00000624727 2117 ntBASIC4.28□□□□□ -1.72
AP1S3Q96PC3 AC000123.3-201ENST00000624029 4975 ntBASIC4.28□□□□□ -1.72
AP1S3Q96PC3 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 FBXL21-201ENST00000297158 1305 ntBASIC4.28□□□□□ -1.72
AP1S3Q96PC3 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 RPL11P4-201ENST00000332269 436 ntBASIC4.28□□□□□ -1.72
AP1S3Q96PC3 PRELID1P1-201ENST00000403549 660 ntBASIC4.28□□□□□ -1.72
AP1S3Q96PC3 AL132875.1-201ENST00000403623 949 ntBASIC4.28□□□□□ -1.72
AP1S3Q96PC3 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 RPL35AP31-201ENST00000418340 337 ntBASIC4.28□□□□□ -1.72
AP1S3Q96PC3 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 OR6R1P-201ENST00000431838 940 ntBASIC4.28□□□□□ -1.72
AP1S3Q96PC3 PSMD10P2-201ENST00000432890 672 ntBASIC4.28□□□□□ -1.72
AP1S3Q96PC3 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 PSMD8P1-201ENST00000436275 769 ntBASIC4.28□□□□□ -1.72
AP1S3Q96PC3 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 AC097359.1-201ENST00000447946 463 ntBASIC4.28□□□□□ -1.72
AP1S3Q96PC3 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 AL034369.1-201ENST00000453808 477 ntBASIC4.28□□□□□ -1.72
AP1S3Q96PC3 RPL31P11-202ENST00000454082 372 ntBASIC4.28□□□□□ -1.72
AP1S3Q96PC3 RN7SL267P-201ENST00000485107 261 ntBASIC4.28□□□□□ -1.72
AP1S3Q96PC3 RPL34P33-201ENST00000486062 334 ntBASIC4.28□□□□□ -1.72
AP1S3Q96PC3 RN7SL655P-201ENST00000486087 298 ntBASIC4.28□□□□□ -1.72
AP1S3Q96PC3 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 RNA5SP75-201ENST00000516841 111 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms