Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC233968.1-201ENST00000611212 1300 ntBASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 SNORA21-201ENST00000362423 132 ntBASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 RNA5SP85-201ENST00000365378 119 ntBASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 GPS2P1-201ENST00000411761 986 ntBASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 AL133482.1-201ENST00000415988 498 ntBASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 AC130360.1-201ENST00000425489 1117 ntBASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 NPM1P22-201ENST00000427761 952 ntBASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 TMEM183AP1-205ENST00000432739 290 ntBASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 LINC02210-201ENST00000444561 288 ntBASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 FTLP8-201ENST00000446770 267 ntBASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 AL445991.1-201ENST00000450381 475 ntBASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 AC099670.1-201ENST00000455141 783 ntBASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 OR2A3P-201ENST00000493774 953 ntBASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 KCTD9P6-201ENST00000522306 950 ntBASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 AC130365.2-201ENST00000525882 1201 ntBASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 OR10D4P-201ENST00000525892 951 ntBASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 AP004609.2-201ENST00000532177 190 ntBASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 ASB8-203ENST00000535988 679 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 AC009852.2-201ENST00000567898 485 ntBASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 RFPL4AP6-201ENST00000616792 846 ntBASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 Six3os1_2.1-201ENST00000616963 217 ntBASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 TMEM30CP-203ENST00000637814 1035 ntBASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC71LQ8N9Z2 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 OR9K1P-202ENST00000641111 3217 ntBASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 MIR137-201ENST00000385223 102 ntBASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 U3.28-201ENST00000391249 210 ntBASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 THEM7P-201ENST00000419556 672 ntBASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 AC019205.1-201ENST00000421830 730 ntBASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 AL034379.1-201ENST00000423216 253 ntBASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC71LQ8N9Z2 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms