Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.57□□□□□ -1.52
CLIP4Q8N3C7 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
CLIP4Q8N3C7 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLIP4Q8N3C7 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLIP4Q8N3C7 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLIP4Q8N3C7 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.57□□□□□ -1.52
CLIP4Q8N3C7 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.57□□□□□ -1.52
CLIP4Q8N3C7 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 AC004076.2-201ENST00000620532 3323 ntBASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 RNU6-386P-201ENST00000362650 107 ntBASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 SNORD1C-201ENST00000363315 78 ntBASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 MIR7-1-201ENST00000384871 110 ntBASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 RN7SKP166-201ENST00000410812 305 ntBASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 AC013268.2-201ENST00000420753 337 ntBASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 MTCYBP32-201ENST00000427945 1084 ntBASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 CUBNP2-201ENST00000443534 1139 ntBASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 ATG10-AS1-201ENST00000504846 648 ntBASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 AC119751.4-201ENST00000507498 357 ntBASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 AC025768.1-201ENST00000510057 267 ntBASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 TOMM22P4-201ENST00000511318 336 ntBASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 HMGN1P17-201ENST00000513734 295 ntBASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 AC116917.1-201ENST00000520558 305 ntBASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 AP001000.1-201ENST00000526843 742 ntBASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 HMGN2P47-201ENST00000559378 272 ntBASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 AL158211.1-201ENST00000566763 763 ntBASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 SMIM12P1-201ENST00000603004 274 ntBASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 OR4H6P-202ENST00000603819 340 ntBASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 AL391834.2-201ENST00000609982 546 ntBASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 uc_338.26-201ENST00000612659 160 ntBASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 AL080312.2-201ENST00000613001 630 ntBASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 AC015819.1-201ENST00000613588 663 ntBASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 AC096861.1-201ENST00000616652 240 ntBASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 RFPL4AP6-201ENST00000616792 846 ntBASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 AP001002.1-201ENST00000625148 1513 ntBASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 AC020656.2-201ENST00000613291 5309 ntBASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CLIP4Q8N3C7 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 SNORA21-201ENST00000362423 132 ntBASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 RNU6-925P-201ENST00000384629 104 ntBASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 AL139039.2-201ENST00000407436 479 ntBASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 RPL35AP31-201ENST00000418340 337 ntBASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 SETP9-201ENST00000423837 832 ntBASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 CYCSP51-201ENST00000443545 318 ntBASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 NPM1P19-201ENST00000450070 712 ntBASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 SDC4P-201ENST00000453285 601 ntBASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 CEACAMP11-201ENST00000455211 583 ntBASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
CLIP4Q8N3C7 MTATP6P9-201ENST00000515039 680 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms