Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 DHFRP1-201ENST00000579682 559 ntBASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDKL3Q8IVW4 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 AL121886.1-201ENST00000358609 435 ntBASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 RNA5SP477-201ENST00000362639 119 ntBASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 AC099535.1-201ENST00000408928 371 ntBASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 AC096921.1-201ENST00000411661 375 ntBASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 Z83838.1-202ENST00000456225 839 ntBASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 AC117394.1-201ENST00000477323 567 ntBASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 RPS17P5-201ENST00000498293 408 ntBASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 OR5H7P-201ENST00000514084 930 ntBASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 Y_RNA.667-201ENST00000516212 107 ntBASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 RNA5SP438-201ENST00000516561 112 ntBASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 AC011853.1-201ENST00000518911 454 ntBASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 AC027369.2-201ENST00000528030 440 ntBASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 AP001284.1-201ENST00000528393 2118 ntBASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 LINC00556-201ENST00000569603 412 ntBASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 AC024884.1-201ENST00000620583 399 ntBASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 AC022919.1-201ENST00000624979 626 ntBASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 HSPD1P7-201ENST00000447985 1686 ntBASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDKL3Q8IVW4 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 MTND5P12-201ENST00000502851 1449 ntBASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 TMSB4XP2-201ENST00000335179 210 ntBASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 AL159987.1-201ENST00000347911 293 ntBASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 AC005042.1-201ENST00000393397 800 ntBASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 RNU2-18P-201ENST00000411224 162 ntBASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 AC069154.1-201ENST00000432914 542 ntBASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 AC009963.4-201ENST00000448535 339 ntBASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 CTSLP6-201ENST00000458273 1002 ntBASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 RPS17P15-201ENST00000475609 349 ntBASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 ATP5LP5-201ENST00000483050 299 ntBASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 RPL32P33-201ENST00000487023 394 ntBASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 AC073610.1-201ENST00000489971 396 ntBASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 SCARNA6.1-201ENST00000516989 238 ntBASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.84□□□□□ -1.47
CDKL3Q8IVW4 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms