Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RNF43Q68DV7 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF43Q68DV7 AC020978.6-201ENST00000571197 3177 ntBASIC7.31□□□□□ -1.24
RNF43Q68DV7 AL596244.1-201ENST00000567068 3779 ntBASIC7.31□□□□□ -1.24
RNF43Q68DV7 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RNF43Q68DV7 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF43Q68DV7 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF43Q68DV7 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RNF43Q68DV7 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 RNA5SP53-201ENST00000391299 120 ntBASIC7.31□□□□□ -1.24
RNF43Q68DV7 AGR3-202ENST00000402239 563 ntTSL 2 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 MTND1P2-201ENST00000430604 821 ntBASIC7.31□□□□□ -1.24
RNF43Q68DV7 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RNF43Q68DV7 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF43Q68DV7 OR51P1P-201ENST00000447547 942 ntBASIC7.31□□□□□ -1.24
RNF43Q68DV7 SUMO2P2-201ENST00000456482 255 ntBASIC7.31□□□□□ -1.24
RNF43Q68DV7 AMD1P1-201ENST00000457220 922 ntBASIC7.31□□□□□ -1.24
RNF43Q68DV7 HMGN1P10-201ENST00000474557 553 ntBASIC7.31□□□□□ -1.24
RNF43Q68DV7 AC098818.1-201ENST00000478593 252 ntBASIC7.31□□□□□ -1.24
RNF43Q68DV7 AC068522.1-201ENST00000482895 345 ntBASIC7.31□□□□□ -1.24
RNF43Q68DV7 AC041039.1-201ENST00000485656 536 ntBASIC7.31□□□□□ -1.24
RNF43Q68DV7 RPS10P20-201ENST00000494130 463 ntBASIC7.31□□□□□ -1.24
RNF43Q68DV7 AC093890.1-201ENST00000502554 540 ntBASIC7.31□□□□□ -1.24
RNF43Q68DV7 APOBEC3AP1-201ENST00000511396 287 ntBASIC7.31□□□□□ -1.24
RNF43Q68DV7 DCAF13P2-201ENST00000514188 555 ntBASIC7.31□□□□□ -1.24
RNF43Q68DV7 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.31□□□□□ -1.24
RNF43Q68DV7 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 AL135978.1-201ENST00000553618 1266 ntBASIC7.31□□□□□ -1.24
RNF43Q68DV7 AL121579.1-201ENST00000555129 305 ntBASIC7.31□□□□□ -1.24
RNF43Q68DV7 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 AC090695.1-201ENST00000561269 1222 ntBASIC7.31□□□□□ -1.24
RNF43Q68DV7 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 AC022146.1-201ENST00000595307 847 ntBASIC7.31□□□□□ -1.24
RNF43Q68DV7 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 AC068802.1-201ENST00000603420 732 ntBASIC7.31□□□□□ -1.24
RNF43Q68DV7 AL158211.4-201ENST00000606988 584 ntBASIC7.31□□□□□ -1.24
RNF43Q68DV7 MIR7109-201ENST00000613748 65 ntBASIC7.31□□□□□ -1.24
RNF43Q68DV7 RN7SL126P-201ENST00000616400 299 ntBASIC7.31□□□□□ -1.24
RNF43Q68DV7 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF43Q68DV7 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RNF43Q68DV7 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RNF43Q68DV7 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RNF43Q68DV7 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF43Q68DV7 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
RNF43Q68DV7 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF43Q68DV7 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RNF43Q68DV7 KARSP2-201ENST00000415696 1639 ntBASIC7.3□□□□□ -1.24
RNF43Q68DV7 AC132219.2-201ENST00000624416 2327 ntBASIC7.3□□□□□ -1.24
RNF43Q68DV7 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
RNF43Q68DV7 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.3□□□□□ -1.24
RNF43Q68DV7 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.24
RNF43Q68DV7 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.3□□□□□ -1.24
RNF43Q68DV7 RPS4XP5-202ENST00000449995 1334 ntBASIC7.3□□□□□ -1.24
RNF43Q68DV7 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
RNF43Q68DV7 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RNF43Q68DV7 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.3□□□□□ -1.24
RNF43Q68DV7 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.3□□□□□ -1.24
RNF43Q68DV7 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
RNF43Q68DV7 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
RNF43Q68DV7 CCDC150P1-201ENST00000537123 2215 ntBASIC7.3□□□□□ -1.24
RNF43Q68DV7 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.3□□□□□ -1.24
RNF43Q68DV7 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.24
RNF43Q68DV7 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RNF43Q68DV7 RN7SKP55-201ENST00000364888 307 ntBASIC7.3□□□□□ -1.24
RNF43Q68DV7 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
RNF43Q68DV7 RNU6-1055P-201ENST00000391085 107 ntBASIC7.3□□□□□ -1.24
RNF43Q68DV7 Z68694.1-201ENST00000413929 841 ntBASIC7.3□□□□□ -1.24
RNF43Q68DV7 AL445183.3-201ENST00000414168 502 ntBASIC7.3□□□□□ -1.24
RNF43Q68DV7 MTCO1P43-201ENST00000431831 488 ntBASIC7.3□□□□□ -1.24
RNF43Q68DV7 NANOGP2-201ENST00000435391 727 ntBASIC7.3□□□□□ -1.24
RNF43Q68DV7 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC7.3□□□□□ -1.24
RNF43Q68DV7 USP9YP35-201ENST00000435696 412 ntBASIC7.3□□□□□ -1.24
RNF43Q68DV7 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms