Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.65□□□□□ -1.5
CDKL1Q00532 MIR4260-201ENST00000583107 67 ntBASIC5.65□□□□□ -1.5
CDKL1Q00532 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.65□□□□□ -1.5
CDKL1Q00532 AC087468.1-201ENST00000604365 630 ntBASIC5.65□□□□□ -1.5
CDKL1Q00532 AL031601.1-201ENST00000605702 394 ntBASIC5.65□□□□□ -1.5
CDKL1Q00532 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.65□□□□□ -1.5
CDKL1Q00532 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.65□□□□□ -1.5
CDKL1Q00532 MIR7109-201ENST00000613748 65 ntBASIC5.65□□□□□ -1.5
CDKL1Q00532 AC015712.7-201ENST00000615211 635 ntBASIC5.65□□□□□ -1.5
CDKL1Q00532 AC073592.6-201ENST00000624271 415 ntBASIC5.65□□□□□ -1.5
CDKL1Q00532 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.65□□□□□ -1.5
CDKL1Q00532 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.65□□□□□ -1.5
CDKL1Q00532 AL137141.1-201ENST00000624622 4836 ntBASIC5.65□□□□□ -1.51
CDKL1Q00532 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CDKL1Q00532 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.65□□□□□ -1.51
CDKL1Q00532 SSXP3-201ENST00000442971 1300 ntBASIC5.65□□□□□ -1.51
CDKL1Q00532 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.65□□□□□ -1.51
CDKL1Q00532 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CDKL1Q00532 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CDKL1Q00532 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CDKL1Q00532 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CDKL1Q00532 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
CDKL1Q00532 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDKL1Q00532 MIPEPP2-201ENST00000422560 1819 ntBASIC5.64□□□□□ -1.51
CDKL1Q00532 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
CDKL1Q00532 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CDKL1Q00532 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDKL1Q00532 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDKL1Q00532 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDKL1Q00532 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CDKL1Q00532 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CDKL1Q00532 RN7SKP145-201ENST00000363291 303 ntBASIC5.64□□□□□ -1.51
CDKL1Q00532 RNA5SP500-201ENST00000364486 119 ntBASIC5.64□□□□□ -1.51
CDKL1Q00532 RNU1-136P-201ENST00000384181 164 ntBASIC5.64□□□□□ -1.51
CDKL1Q00532 AC087752.1-201ENST00000391360 558 ntBASIC5.64□□□□□ -1.51
CDKL1Q00532 RN7SKP29-201ENST00000410957 272 ntBASIC5.64□□□□□ -1.51
CDKL1Q00532 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.64□□□□□ -1.51
CDKL1Q00532 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.64□□□□□ -1.51
CDKL1Q00532 AC242426.1-201ENST00000435270 960 ntBASIC5.64□□□□□ -1.51
CDKL1Q00532 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.64□□□□□ -1.51
CDKL1Q00532 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CDKL1Q00532 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDKL1Q00532 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.64□□□□□ -1.51
CDKL1Q00532 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.64□□□□□ -1.51
CDKL1Q00532 RPS17P15-201ENST00000475609 349 ntBASIC5.64□□□□□ -1.51
CDKL1Q00532 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDKL1Q00532 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.64□□□□□ -1.51
CDKL1Q00532 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.64□□□□□ -1.51
CDKL1Q00532 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.64□□□□□ -1.51
CDKL1Q00532 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.64□□□□□ -1.51
CDKL1Q00532 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.64□□□□□ -1.51
CDKL1Q00532 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDKL1Q00532 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.64□□□□□ -1.51
CDKL1Q00532 AC079905.1-201ENST00000549280 475 ntBASIC5.64□□□□□ -1.51
CDKL1Q00532 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.64□□□□□ -1.51
CDKL1Q00532 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.64□□□□□ -1.51
CDKL1Q00532 AC002069.2-201ENST00000603580 883 ntBASIC5.64□□□□□ -1.51
CDKL1Q00532 AL049840.6-201ENST00000604583 345 ntBASIC5.64□□□□□ -1.51
CDKL1Q00532 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDKL1Q00532 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.64□□□□□ -1.51
CDKL1Q00532 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDKL1Q00532 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDKL1Q00532 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.64□□□□□ -1.51
CDKL1Q00532 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.64□□□□□ -1.51
CDKL1Q00532 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDKL1Q00532 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDKL1Q00532 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.64□□□□□ -1.51
CDKL1Q00532 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDKL1Q00532 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDKL1Q00532 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDKL1Q00532 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
CDKL1Q00532 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.63□□□□□ -1.51
CDKL1Q00532 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.63□□□□□ -1.51
CDKL1Q00532 AP004607.3-201ENST00000530354 3915 ntBASIC5.63□□□□□ -1.51
CDKL1Q00532 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDKL1Q00532 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDKL1Q00532 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDKL1Q00532 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDKL1Q00532 RNA5SP273-201ENST00000362484 113 ntBASIC5.63□□□□□ -1.51
CDKL1Q00532 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDKL1Q00532 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDKL1Q00532 PEX12P1-201ENST00000400284 1048 ntBASIC5.63□□□□□ -1.51
CDKL1Q00532 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.63□□□□□ -1.51
CDKL1Q00532 BX119904.3-201ENST00000428194 957 ntBASIC5.63□□□□□ -1.51
CDKL1Q00532 AC069154.1-201ENST00000432914 542 ntBASIC5.63□□□□□ -1.51
CDKL1Q00532 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.63□□□□□ -1.51
CDKL1Q00532 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.63□□□□□ -1.51
CDKL1Q00532 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.63□□□□□ -1.51
CDKL1Q00532 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.63□□□□□ -1.51
CDKL1Q00532 MEMO1P4-201ENST00000453590 386 ntBASIC5.63□□□□□ -1.51
CDKL1Q00532 AC093166.4-201ENST00000457867 318 ntBASIC5.63□□□□□ -1.51
CDKL1Q00532 OR7E157P-201ENST00000494376 911 ntBASIC5.63□□□□□ -1.51
CDKL1Q00532 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.63□□□□□ -1.51
CDKL1Q00532 AC105420.1-201ENST00000504389 582 ntBASIC5.63□□□□□ -1.51
CDKL1Q00532 AC025458.1-201ENST00000506046 166 ntBASIC5.63□□□□□ -1.51
CDKL1Q00532 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.63□□□□□ -1.51
CDKL1Q00532 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CDKL1Q00532 AC011853.1-201ENST00000518911 454 ntBASIC5.63□□□□□ -1.51
CDKL1Q00532 HMGN2P36-201ENST00000529541 409 ntBASIC5.63□□□□□ -1.51
CDKL1Q00532 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms