Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 TOMM22P4-201ENST00000511318 336 ntBASIC5.76□□□□□ -1.49
RAE1P78406 CR383658.1-201ENST00000514609 734 ntBASIC5.76□□□□□ -1.49
RAE1P78406 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.76□□□□□ -1.49
RAE1P78406 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.76□□□□□ -1.49
RAE1P78406 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.76□□□□□ -1.49
RAE1P78406 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RAE1P78406 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RAE1P78406 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.76□□□□□ -1.49
RAE1P78406 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.76□□□□□ -1.49
RAE1P78406 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.76□□□□□ -1.49
RAE1P78406 uc_338.26-201ENST00000612659 160 ntBASIC5.76□□□□□ -1.49
RAE1P78406 RFPL4AP6-201ENST00000616792 846 ntBASIC5.76□□□□□ -1.49
RAE1P78406 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RAE1P78406 AC090617.9-201ENST00000623751 147 ntBASIC5.76□□□□□ -1.49
RAE1P78406 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.76□□□□□ -1.49
RAE1P78406 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.76□□□□□ -1.49
RAE1P78406 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.76□□□□□ -1.49
RAE1P78406 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.76□□□□□ -1.49
RAE1P78406 FRG1DP-201ENST00000635586 771 ntBASIC5.76□□□□□ -1.49
RAE1P78406 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.76□□□□□ -1.49
RAE1P78406 AC013437.2-201ENST00000639587 677 ntBASIC5.76□□□□□ -1.49
RAE1P78406 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.76□□□□□ -1.49
RAE1P78406 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RAE1P78406 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.76□□□□□ -1.49
RAE1P78406 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.76□□□□□ -1.49
RAE1P78406 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.76□□□□□ -1.49
RAE1P78406 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RAE1P78406 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.76□□□□□ -1.49
RAE1P78406 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RAE1P78406 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.76□□□□□ -1.49
RAE1P78406 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RAE1P78406 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RAE1P78406 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.76□□□□□ -1.49
RAE1P78406 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.76□□□□□ -1.49
RAE1P78406 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
RAE1P78406 AC007114.2-201ENST00000576014 4281 ntBASIC5.75□□□□□ -1.49
RAE1P78406 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
RAE1P78406 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.75□□□□□ -1.49
RAE1P78406 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.75□□□□□ -1.49
RAE1P78406 AP000641.1-201ENST00000531988 1639 ntBASIC5.75□□□□□ -1.49
RAE1P78406 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
RAE1P78406 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RAE1P78406 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
RAE1P78406 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.75□□□□□ -1.49
RAE1P78406 AC245096.1-201ENST00000413104 546 ntBASIC5.75□□□□□ -1.49
RAE1P78406 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.75□□□□□ -1.49
RAE1P78406 RPL35AP31-201ENST00000418340 337 ntBASIC5.75□□□□□ -1.49
RAE1P78406 GLUD1P9-201ENST00000420997 1173 ntBASIC5.75□□□□□ -1.49
RAE1P78406 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.75□□□□□ -1.49
RAE1P78406 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.75□□□□□ -1.49
RAE1P78406 AC099782.1-201ENST00000425889 474 ntBASIC5.75□□□□□ -1.49
RAE1P78406 AC013262.1-201ENST00000426710 252 ntBASIC5.75□□□□□ -1.49
RAE1P78406 USP12PY-201ENST00000427677 1064 ntBASIC5.75□□□□□ -1.49
RAE1P78406 TRBV26OR9-2-201ENST00000432077 293 ntBASIC5.75□□□□□ -1.49
RAE1P78406 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC5.75□□□□□ -1.49
RAE1P78406 RPSAP32-201ENST00000432681 526 ntBASIC5.75□□□□□ -1.49
RAE1P78406 RPS3AP38-201ENST00000435889 763 ntBASIC5.75□□□□□ -1.49
RAE1P78406 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.75□□□□□ -1.49
RAE1P78406 CUBNP2-201ENST00000443534 1139 ntBASIC5.75□□□□□ -1.49
RAE1P78406 RPL23AP23-201ENST00000452590 471 ntBASIC5.75□□□□□ -1.49
RAE1P78406 AC002553.3-201ENST00000453002 341 ntBASIC5.75□□□□□ -1.49
RAE1P78406 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.75□□□□□ -1.49
RAE1P78406 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.75□□□□□ -1.49
RAE1P78406 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.75□□□□□ -1.49
RAE1P78406 CTSLP6-201ENST00000458273 1002 ntBASIC5.75□□□□□ -1.49
RAE1P78406 ACA64.4-201ENST00000459070 127 ntBASIC5.75□□□□□ -1.49
RAE1P78406 RPL29P23-201ENST00000486188 442 ntBASIC5.75□□□□□ -1.49
RAE1P78406 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.75□□□□□ -1.49
RAE1P78406 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.75□□□□□ -1.49
RAE1P78406 AC112518.2-201ENST00000508565 425 ntBASIC5.75□□□□□ -1.49
RAE1P78406 MTND2P32-201ENST00000521584 1038 ntBASIC5.75□□□□□ -1.49
RAE1P78406 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RAE1P78406 AC004923.2-201ENST00000529649 369 ntBASIC5.75□□□□□ -1.49
RAE1P78406 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.75□□□□□ -1.49
RAE1P78406 DPPA3P2-201ENST00000553589 478 ntBASIC5.75□□□□□ -1.49
RAE1P78406 GLRXP2-201ENST00000555594 321 ntBASIC5.75□□□□□ -1.49
RAE1P78406 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.75□□□□□ -1.49
RAE1P78406 AL049838.1-201ENST00000563647 981 ntBASIC5.75□□□□□ -1.49
RAE1P78406 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RAE1P78406 MRPS21P9-201ENST00000571150 257 ntBASIC5.75□□□□□ -1.49
RAE1P78406 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.75□□□□□ -1.49
RAE1P78406 ARGFXP2-201ENST00000579304 949 ntBASIC5.75□□□□□ -1.49
RAE1P78406 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.75□□□□□ -1.49
RAE1P78406 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.75□□□□□ -1.49
RAE1P78406 BNIP3P38-201ENST00000601117 544 ntBASIC5.75□□□□□ -1.49
RAE1P78406 AF230666.2-201ENST00000602328 725 ntBASIC5.75□□□□□ -1.49
RAE1P78406 AC005479.3-201ENST00000602790 431 ntBASIC5.75□□□□□ -1.49
RAE1P78406 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.75□□□□□ -1.49
RAE1P78406 uc_338.29-201ENST00000615099 168 ntBASIC5.75□□□□□ -1.49
RAE1P78406 RMST_5.1-201ENST00000618704 126 ntBASIC5.75□□□□□ -1.49
RAE1P78406 AL357562.1-201ENST00000624911 609 ntBASIC5.75□□□□□ -1.49
RAE1P78406 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.75□□□□□ -1.49
RAE1P78406 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
RAE1P78406 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.75□□□□□ -1.49
RAE1P78406 SAMM50P1-201ENST00000455403 1399 ntBASIC5.75□□□□□ -1.49
RAE1P78406 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RAE1P78406 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
RAE1P78406 AC090220.1-201ENST00000593078 1699 ntBASIC5.75□□□□□ -1.49
RAE1P78406 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.75□□□□□ -1.49
RAE1P78406 AL078595.2-201ENST00000605309 1780 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms