Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CLDN12P56749 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CLDN12P56749 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CLDN12P56749 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.9□□□□□ -1.62
CLDN12P56749 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
CLDN12P56749 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CLDN12P56749 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
CLDN12P56749 OR9K1P-202ENST00000641111 3217 ntBASIC4.9□□□□□ -1.62
CLDN12P56749 AC003985.2-201ENST00000562268 1669 ntBASIC4.9□□□□□ -1.62
CLDN12P56749 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CLDN12P56749 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.9□□□□□ -1.62
CLDN12P56749 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CLDN12P56749 AC092681.1-201ENST00000297369 291 ntBASIC4.9□□□□□ -1.63
CLDN12P56749 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CLDN12P56749 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CLDN12P56749 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLDN12P56749 MIR188-201ENST00000385034 86 ntBASIC4.9□□□□□ -1.63
CLDN12P56749 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CLDN12P56749 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CLDN12P56749 THEM7P-201ENST00000419556 672 ntBASIC4.9□□□□□ -1.63
CLDN12P56749 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC4.9□□□□□ -1.63
CLDN12P56749 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLDN12P56749 GAPDHP19-201ENST00000431768 1005 ntBASIC4.9□□□□□ -1.63
CLDN12P56749 AL353662.1-201ENST00000439099 327 ntBASIC4.9□□□□□ -1.63
CLDN12P56749 AC010240.2-201ENST00000445363 1205 ntBASIC4.9□□□□□ -1.63
CLDN12P56749 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CLDN12P56749 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.9□□□□□ -1.63
CLDN12P56749 AC093166.4-201ENST00000457867 318 ntBASIC4.9□□□□□ -1.63
CLDN12P56749 RPS23P2-201ENST00000463671 415 ntBASIC4.9□□□□□ -1.63
CLDN12P56749 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC4.9□□□□□ -1.63
CLDN12P56749 RNA5SP96-201ENST00000516041 107 ntBASIC4.9□□□□□ -1.63
CLDN12P56749 SEPT10P1-201ENST00000517342 1162 ntBASIC4.9□□□□□ -1.63
CLDN12P56749 IGLV3-30-201ENST00000524362 298 ntBASIC4.9□□□□□ -1.63
CLDN12P56749 AC122688.1-201ENST00000541494 223 ntBASIC4.9□□□□□ -1.63
CLDN12P56749 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.9□□□□□ -1.63
CLDN12P56749 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC4.9□□□□□ -1.63
CLDN12P56749 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC4.9□□□□□ -1.63
CLDN12P56749 AL139124.1-201ENST00000609123 421 ntBASIC4.9□□□□□ -1.63
CLDN12P56749 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.9□□□□□ -1.63
CLDN12P56749 AC091059.2-201ENST00000623355 614 ntBASIC4.9□□□□□ -1.63
CLDN12P56749 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.9□□□□□ -1.63
CLDN12P56749 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CLDN12P56749 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLDN12P56749 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLDN12P56749 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLDN12P56749 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLDN12P56749 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CLDN12P56749 AC079097.1-201ENST00000512187 1399 ntBASIC4.9□□□□□ -1.63
CLDN12P56749 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CLDN12P56749 AC006206.1-201ENST00000544842 3387 ntBASIC4.9□□□□□ -1.63
CLDN12P56749 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.9□□□□□ -1.63
CLDN12P56749 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN12P56749 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.89□□□□□ -1.63
CLDN12P56749 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.89□□□□□ -1.63
CLDN12P56749 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CLDN12P56749 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.89□□□□□ -1.63
CLDN12P56749 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CLDN12P56749 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
CLDN12P56749 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CLDN12P56749 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN12P56749 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.89□□□□□ -1.63
CLDN12P56749 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CLDN12P56749 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN12P56749 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN12P56749 TINAG-203ENST00000370869 782 ntTSL 3 BASIC4.89□□□□□ -1.63
CLDN12P56749 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CLDN12P56749 AL357752.1-201ENST00000412817 349 ntBASIC4.89□□□□□ -1.63
CLDN12P56749 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN12P56749 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN12P56749 AC019205.1-201ENST00000421830 730 ntBASIC4.89□□□□□ -1.63
CLDN12P56749 AC108479.1-201ENST00000431142 427 ntBASIC4.89□□□□□ -1.63
CLDN12P56749 PA2G4P1-201ENST00000442248 1197 ntBASIC4.89□□□□□ -1.63
CLDN12P56749 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC4.89□□□□□ -1.63
CLDN12P56749 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN12P56749 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC4.89□□□□□ -1.63
CLDN12P56749 TAAR4P-201ENST00000454843 1039 ntBASIC4.89□□□□□ -1.63
CLDN12P56749 RN7SL393P-201ENST00000463588 296 ntBASIC4.89□□□□□ -1.63
CLDN12P56749 AC091544.1-201ENST00000484702 348 ntBASIC4.89□□□□□ -1.63
CLDN12P56749 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.89□□□□□ -1.63
CLDN12P56749 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC4.89□□□□□ -1.63
CLDN12P56749 AC139365.2-201ENST00000517972 253 ntBASIC4.89□□□□□ -1.63
CLDN12P56749 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.89□□□□□ -1.63
CLDN12P56749 AC079064.1-201ENST00000528365 362 ntBASIC4.89□□□□□ -1.63
CLDN12P56749 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.89□□□□□ -1.63
CLDN12P56749 AC004232.2-201ENST00000574245 821 ntBASIC4.89□□□□□ -1.63
CLDN12P56749 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.89□□□□□ -1.63
CLDN12P56749 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN12P56749 AP005119.1-201ENST00000580956 292 ntBASIC4.89□□□□□ -1.63
CLDN12P56749 MIR4701-201ENST00000583094 63 ntBASIC4.89□□□□□ -1.63
CLDN12P56749 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN12P56749 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN12P56749 AC068768.2-201ENST00000602352 343 ntBASIC4.89□□□□□ -1.63
CLDN12P56749 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN12P56749 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN12P56749 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN12P56749 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN12P56749 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.89□□□□□ -1.63
CLDN12P56749 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN12P56749 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN12P56749 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms