Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC083795.1-201ENST00000491760 320 ntBASIC6.24□□□□□ -1.41
HDAC4P56524 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.24□□□□□ -1.41
HDAC4P56524 AC090568.1-201ENST00000509499 856 ntBASIC6.24□□□□□ -1.41
HDAC4P56524 PRMT5P1-201ENST00000514351 598 ntBASIC6.24□□□□□ -1.41
HDAC4P56524 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.24□□□□□ -1.41
HDAC4P56524 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.24□□□□□ -1.41
HDAC4P56524 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.24□□□□□ -1.41
HDAC4P56524 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.24□□□□□ -1.41
HDAC4P56524 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.24□□□□□ -1.41
HDAC4P56524 AC006512.2-201ENST00000543250 486 ntBASIC6.24□□□□□ -1.41
HDAC4P56524 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.24□□□□□ -1.41
HDAC4P56524 AC011270.1-201ENST00000558606 583 ntBASIC6.24□□□□□ -1.41
HDAC4P56524 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.24□□□□□ -1.41
HDAC4P56524 AC117490.2-201ENST00000610042 594 ntBASIC6.24□□□□□ -1.41
HDAC4P56524 AL162574.2-201ENST00000614618 657 ntBASIC6.24□□□□□ -1.41
HDAC4P56524 AC069234.4-201ENST00000621276 412 ntBASIC6.24□□□□□ -1.41
HDAC4P56524 AL136228.1-201ENST00000622221 319 ntBASIC6.24□□□□□ -1.41
HDAC4P56524 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.24□□□□□ -1.41
HDAC4P56524 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.24□□□□□ -1.41
HDAC4P56524 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
HDAC4P56524 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.24□□□□□ -1.41
HDAC4P56524 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HDAC4P56524 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.24□□□□□ -1.41
HDAC4P56524 GNL2P1-201ENST00000451274 2190 ntBASIC6.24□□□□□ -1.41
HDAC4P56524 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.24□□□□□ -1.41
HDAC4P56524 CUL4AP1-201ENST00000514750 1863 ntBASIC6.24□□□□□ -1.41
HDAC4P56524 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
HDAC4P56524 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HDAC4P56524 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.23□□□□□ -1.41
HDAC4P56524 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
HDAC4P56524 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.23□□□□□ -1.41
HDAC4P56524 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HDAC4P56524 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HDAC4P56524 AL731532.1-201ENST00000623972 4236 ntBASIC6.23□□□□□ -1.41
HDAC4P56524 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.23□□□□□ -1.41
HDAC4P56524 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HDAC4P56524 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HDAC4P56524 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HDAC4P56524 Y_RNA.62-201ENST00000362840 99 ntBASIC6.23□□□□□ -1.41
HDAC4P56524 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.23□□□□□ -1.41
HDAC4P56524 GNG5P2-201ENST00000372054 207 ntBASIC6.23□□□□□ -1.41
HDAC4P56524 AC007068.1-201ENST00000396690 844 ntBASIC6.23□□□□□ -1.41
HDAC4P56524 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.23□□□□□ -1.41
HDAC4P56524 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.23□□□□□ -1.41
HDAC4P56524 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.23□□□□□ -1.41
HDAC4P56524 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.23□□□□□ -1.41
HDAC4P56524 RPL6P30-201ENST00000443382 862 ntBASIC6.23□□□□□ -1.41
HDAC4P56524 AC089999.1-201ENST00000460336 374 ntBASIC6.23□□□□□ -1.41
HDAC4P56524 AC108751.3-201ENST00000461814 1020 ntBASIC6.23□□□□□ -1.41
HDAC4P56524 SEPT7P6-201ENST00000469999 1143 ntBASIC6.23□□□□□ -1.41
HDAC4P56524 AC090058.1-201ENST00000498788 435 ntBASIC6.23□□□□□ -1.41
HDAC4P56524 RBBP4P1-201ENST00000502424 1276 ntBASIC6.23□□□□□ -1.41
HDAC4P56524 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.23□□□□□ -1.41
HDAC4P56524 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC6.23□□□□□ -1.41
HDAC4P56524 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.23□□□□□ -1.41
HDAC4P56524 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.23□□□□□ -1.41
HDAC4P56524 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.23□□□□□ -1.41
HDAC4P56524 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.23□□□□□ -1.41
HDAC4P56524 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.23□□□□□ -1.41
HDAC4P56524 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.23□□□□□ -1.41
HDAC4P56524 TXNP4-201ENST00000575018 310 ntBASIC6.23□□□□□ -1.41
HDAC4P56524 AC134669.1-201ENST00000581275 672 ntBASIC6.23□□□□□ -1.41
HDAC4P56524 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.23□□□□□ -1.41
HDAC4P56524 AC002069.2-201ENST00000603580 883 ntBASIC6.23□□□□□ -1.41
HDAC4P56524 MIR6809-201ENST00000612189 116 ntBASIC6.23□□□□□ -1.41
HDAC4P56524 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.23□□□□□ -1.41
HDAC4P56524 AL355974.3-201ENST00000617383 467 ntBASIC6.23□□□□□ -1.41
HDAC4P56524 AC096708.4-201ENST00000620563 552 ntBASIC6.23□□□□□ -1.41
HDAC4P56524 AC073592.6-201ENST00000624271 415 ntBASIC6.23□□□□□ -1.41
HDAC4P56524 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.23□□□□□ -1.41
HDAC4P56524 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.23□□□□□ -1.41
HDAC4P56524 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.23□□□□□ -1.41
HDAC4P56524 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
HDAC4P56524 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
HDAC4P56524 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HDAC4P56524 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
HDAC4P56524 AC093909.5-201ENST00000621839 1799 ntBASIC6.23□□□□□ -1.41
HDAC4P56524 RBPJP7-201ENST00000442803 1447 ntBASIC6.23□□□□□ -1.41
HDAC4P56524 RBPJP5-201ENST00000449433 1447 ntBASIC6.23□□□□□ -1.41
HDAC4P56524 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HDAC4P56524 MRRFP1-201ENST00000435941 1675 ntBASIC6.23□□□□□ -1.41
HDAC4P56524 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HDAC4P56524 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
HDAC4P56524 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HDAC4P56524 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HDAC4P56524 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
HDAC4P56524 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HDAC4P56524 THAP12P9-201ENST00000503971 2360 ntBASIC6.22□□□□□ -1.41
HDAC4P56524 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HDAC4P56524 MAPK10-338ENST00000641647 3362 ntBASIC6.22□□□□□ -1.41
HDAC4P56524 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
HDAC4P56524 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HDAC4P56524 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HDAC4P56524 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
HDAC4P56524 RNA5SP211-201ENST00000365516 117 ntBASIC6.22□□□□□ -1.41
HDAC4P56524 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.22□□□□□ -1.41
HDAC4P56524 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
HDAC4P56524 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
HDAC4P56524 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HDAC4P56524 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms