Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
CDH13P55290 SELENOWP1-201ENST00000322792 252 ntBASIC5.7□□□□□ -1.5
CDH13P55290 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH13P55290 AL353625.1-202ENST00000366273 571 ntBASIC5.7□□□□□ -1.5
CDH13P55290 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH13P55290 RAB5CP1-201ENST00000395972 580 ntBASIC5.7□□□□□ -1.5
CDH13P55290 AL096711.1-201ENST00000404780 554 ntBASIC5.7□□□□□ -1.5
CDH13P55290 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.7□□□□□ -1.5
CDH13P55290 KIF4CP-201ENST00000422742 1279 ntBASIC5.7□□□□□ -1.5
CDH13P55290 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.7□□□□□ -1.5
CDH13P55290 SETP9-201ENST00000423837 832 ntBASIC5.7□□□□□ -1.5
CDH13P55290 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.7□□□□□ -1.5
CDH13P55290 AC006455.6-201ENST00000426192 893 ntBASIC5.7□□□□□ -1.5
CDH13P55290 AC023141.8-201ENST00000442554 208 ntBASIC5.7□□□□□ -1.5
CDH13P55290 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.7□□□□□ -1.5
CDH13P55290 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH13P55290 HMGB1P7-201ENST00000450921 612 ntBASIC5.7□□□□□ -1.5
CDH13P55290 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.7□□□□□ -1.5
CDH13P55290 RN7SL254P-201ENST00000460609 284 ntBASIC5.7□□□□□ -1.5
CDH13P55290 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.7□□□□□ -1.5
CDH13P55290 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH13P55290 BTG1P1-201ENST00000540396 508 ntBASIC5.7□□□□□ -1.5
CDH13P55290 AL121594.2-201ENST00000541658 472 ntBASIC5.7□□□□□ -1.5
CDH13P55290 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.7□□□□□ -1.5
CDH13P55290 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH13P55290 AC027281.1-201ENST00000574178 758 ntBASIC5.7□□□□□ -1.5
CDH13P55290 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.7□□□□□ -1.5
CDH13P55290 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH13P55290 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CDH13P55290 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH13P55290 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.7□□□□□ -1.5
CDH13P55290 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.7□□□□□ -1.5
CDH13P55290 AC096708.4-201ENST00000620563 552 ntBASIC5.7□□□□□ -1.5
CDH13P55290 MIR6813-201ENST00000621638 56 ntBASIC5.7□□□□□ -1.5
CDH13P55290 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH13P55290 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CDH13P55290 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CDH13P55290 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
CDH13P55290 AC092111.2-201ENST00000611627 1414 ntBASIC5.7□□□□□ -1.5
CDH13P55290 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH13P55290 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH13P55290 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH13P55290 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CDH13P55290 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH13P55290 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH13P55290 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.7□□□□□ -1.5
CDH13P55290 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH13P55290 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH13P55290 PARP4P2-201ENST00000446672 3326 ntBASIC5.69□□□□□ -1.5
CDH13P55290 AC104964.3-201ENST00000606115 2860 ntBASIC5.69□□□□□ -1.5
CDH13P55290 AL354854.1-201ENST00000455940 1363 ntBASIC5.69□□□□□ -1.5
CDH13P55290 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH13P55290 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CDH13P55290 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CDH13P55290 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDH13P55290 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CDH13P55290 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CDH13P55290 MIR365B-201ENST00000362317 111 ntBASIC5.69□□□□□ -1.5
CDH13P55290 RNA5SP91-201ENST00000390902 119 ntBASIC5.69□□□□□ -1.5
CDH13P55290 AL034417.1-201ENST00000399343 800 ntBASIC5.69□□□□□ -1.5
CDH13P55290 GCNT1P4-201ENST00000404096 329 ntBASIC5.69□□□□□ -1.5
CDH13P55290 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CDH13P55290 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH13P55290 THEM7P-201ENST00000419556 672 ntBASIC5.69□□□□□ -1.5
CDH13P55290 AL139158.1-201ENST00000424719 340 ntBASIC5.69□□□□□ -1.5
CDH13P55290 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.69□□□□□ -1.5
CDH13P55290 AC242426.1-201ENST00000435270 960 ntBASIC5.69□□□□□ -1.5
CDH13P55290 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH13P55290 BMS1P10-201ENST00000443754 1120 ntBASIC5.69□□□□□ -1.5
CDH13P55290 AC007383.1-201ENST00000445875 636 ntBASIC5.69□□□□□ -1.5
CDH13P55290 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH13P55290 RNU1-88P-201ENST00000459274 128 ntBASIC5.69□□□□□ -1.5
CDH13P55290 AL157777.1-201ENST00000468100 304 ntBASIC5.69□□□□□ -1.5
CDH13P55290 OR52A4P-202ENST00000481634 799 ntBASIC5.69□□□□□ -1.5
CDH13P55290 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CDH13P55290 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH13P55290 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH13P55290 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH13P55290 OR7E10P-201ENST00000526420 991 ntBASIC5.69□□□□□ -1.5
CDH13P55290 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH13P55290 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH13P55290 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH13P55290 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH13P55290 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH13P55290 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH13P55290 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH13P55290 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH13P55290 AL163952.1-202ENST00000569625 600 ntBASIC5.69□□□□□ -1.5
CDH13P55290 RN7SL230P-201ENST00000580835 303 ntBASIC5.69□□□□□ -1.5
CDH13P55290 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH13P55290 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.69□□□□□ -1.5
CDH13P55290 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.69□□□□□ -1.5
CDH13P55290 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH13P55290 AC005479.3-201ENST00000602790 431 ntBASIC5.69□□□□□ -1.5
CDH13P55290 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.69□□□□□ -1.5
CDH13P55290 AC145423.1-201ENST00000605712 336 ntBASIC5.69□□□□□ -1.5
CDH13P55290 AC005828.7-201ENST00000607331 556 ntBASIC5.69□□□□□ -1.5
CDH13P55290 HTR1DP1-201ENST00000616500 888 ntBASIC5.69□□□□□ -1.5
CDH13P55290 AC241377.1-201ENST00000619797 406 ntBASIC5.69□□□□□ -1.5
CDH13P55290 AC022400.9-201ENST00000623633 273 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms