Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 MYL6P5-201ENST00000412707 459 ntBASIC5.43□□□□□ -1.54
CDH11P55287 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH11P55287 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH11P55287 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH11P55287 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH11P55287 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.43□□□□□ -1.54
CDH11P55287 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.43□□□□□ -1.54
CDH11P55287 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH11P55287 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.43□□□□□ -1.54
CDH11P55287 AC144530.1-201ENST00000452862 555 ntBASIC5.43□□□□□ -1.54
CDH11P55287 AC079080.1-201ENST00000479841 822 ntBASIC5.43□□□□□ -1.54
CDH11P55287 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH11P55287 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH11P55287 AC090568.1-201ENST00000509499 856 ntBASIC5.43□□□□□ -1.54
CDH11P55287 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.43□□□□□ -1.54
CDH11P55287 PRMT5P1-201ENST00000514351 598 ntBASIC5.43□□□□□ -1.54
CDH11P55287 RNU6-943P-201ENST00000516960 98 ntBASIC5.43□□□□□ -1.54
CDH11P55287 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH11P55287 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH11P55287 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH11P55287 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH11P55287 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH11P55287 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH11P55287 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH11P55287 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.43□□□□□ -1.54
CDH11P55287 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH11P55287 AC107993.1-201ENST00000591343 684 ntBASIC5.43□□□□□ -1.54
CDH11P55287 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.43□□□□□ -1.54
CDH11P55287 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH11P55287 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.43□□□□□ -1.54
CDH11P55287 AP001437.1-201ENST00000608783 456 ntBASIC5.43□□□□□ -1.54
CDH11P55287 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH11P55287 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.43□□□□□ -1.54
CDH11P55287 AL080312.2-201ENST00000613001 630 ntBASIC5.43□□□□□ -1.54
CDH11P55287 AC020923.1-201ENST00000624021 917 ntBASIC5.43□□□□□ -1.54
CDH11P55287 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH11P55287 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH11P55287 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
CDH11P55287 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.43□□□□□ -1.54
CDH11P55287 BCORP1-203ENST00000513194 5093 ntBASIC5.43□□□□□ -1.54
CDH11P55287 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.43□□□□□ -1.54
CDH11P55287 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CDH11P55287 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CDH11P55287 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDH11P55287 AC011416.1-201ENST00000514947 1732 ntBASIC5.43□□□□□ -1.54
CDH11P55287 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CDH11P55287 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH11P55287 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CDH11P55287 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH11P55287 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.42□□□□□ -1.54
CDH11P55287 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
CDH11P55287 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH11P55287 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH11P55287 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH11P55287 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH11P55287 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
CDH11P55287 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH11P55287 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH11P55287 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CDH11P55287 RN7SKP275-201ENST00000364626 301 ntBASIC5.42□□□□□ -1.54
CDH11P55287 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CDH11P55287 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH11P55287 NDUFA5P1-201ENST00000433858 341 ntBASIC5.42□□□□□ -1.54
CDH11P55287 PNKDP1-201ENST00000435914 430 ntBASIC5.42□□□□□ -1.54
CDH11P55287 OR3D1P-201ENST00000438288 955 ntBASIC5.42□□□□□ -1.54
CDH11P55287 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH11P55287 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.42□□□□□ -1.54
CDH11P55287 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.42□□□□□ -1.54
CDH11P55287 AC097463.1-201ENST00000447288 481 ntBASIC5.42□□□□□ -1.54
CDH11P55287 HIGD1AP16-201ENST00000450986 258 ntBASIC5.42□□□□□ -1.54
CDH11P55287 RSU1P1-201ENST00000453416 441 ntBASIC5.42□□□□□ -1.54
CDH11P55287 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH11P55287 AC098847.1-201ENST00000473094 348 ntBASIC5.42□□□□□ -1.54
CDH11P55287 DEFB109A-201ENST00000482450 265 ntBASIC5.42□□□□□ -1.54
CDH11P55287 OR2A3P-201ENST00000493774 953 ntBASIC5.42□□□□□ -1.54
CDH11P55287 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.42□□□□□ -1.54
CDH11P55287 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.42□□□□□ -1.54
CDH11P55287 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.42□□□□□ -1.54
CDH11P55287 RN7SKP35-201ENST00000517210 151 ntBASIC5.42□□□□□ -1.54
CDH11P55287 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CDH11P55287 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH11P55287 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.42□□□□□ -1.54
CDH11P55287 CYCSP38-201ENST00000559840 322 ntBASIC5.42□□□□□ -1.54
CDH11P55287 AL731537.2-201ENST00000561565 951 ntBASIC5.42□□□□□ -1.54
CDH11P55287 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH11P55287 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.42□□□□□ -1.54
CDH11P55287 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH11P55287 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH11P55287 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.42□□□□□ -1.54
CDH11P55287 AC020915.5-201ENST00000596836 964 ntBASIC5.42□□□□□ -1.54
CDH11P55287 AC067773.1-201ENST00000603284 1094 ntBASIC5.42□□□□□ -1.54
CDH11P55287 AC015982.1-201ENST00000608113 465 ntBASIC5.42□□□□□ -1.54
CDH11P55287 AP005131.7-201ENST00000610087 611 ntBASIC5.42□□□□□ -1.54
CDH11P55287 AC092266.1-201ENST00000610958 165 ntBASIC5.42□□□□□ -1.54
CDH11P55287 AC004801.6-201ENST00000616571 978 ntBASIC5.42□□□□□ -1.54
CDH11P55287 SNX18P12-201ENST00000624821 759 ntBASIC5.42□□□□□ -1.54
CDH11P55287 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.42□□□□□ -1.54
CDH11P55287 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
CDH11P55287 AC139426.3-201ENST00000605648 2059 ntBASIC5.42□□□□□ -1.54
CDH11P55287 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms