Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGCS2P54868 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HMGCS2P54868 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.56□□□□□ -1.36
HMGCS2P54868 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.56□□□□□ -1.36
HMGCS2P54868 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGCS2P54868 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGCS2P54868 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
HMGCS2P54868 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.56□□□□□ -1.36
HMGCS2P54868 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGCS2P54868 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.55□□□□□ -1.36
HMGCS2P54868 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
HMGCS2P54868 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGCS2P54868 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGCS2P54868 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGCS2P54868 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.55□□□□□ -1.36
HMGCS2P54868 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
HMGCS2P54868 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGCS2P54868 OR52B5P-201ENST00000435337 951 ntBASIC6.55□□□□□ -1.36
HMGCS2P54868 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.55□□□□□ -1.36
HMGCS2P54868 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.55□□□□□ -1.36
HMGCS2P54868 RN7SKP98-201ENST00000517070 156 ntBASIC6.55□□□□□ -1.36
HMGCS2P54868 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.55□□□□□ -1.36
HMGCS2P54868 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.55□□□□□ -1.36
HMGCS2P54868 AC126177.5-201ENST00000549599 178 ntBASIC6.55□□□□□ -1.36
HMGCS2P54868 HMGN2P6-201ENST00000551091 273 ntBASIC6.55□□□□□ -1.36
HMGCS2P54868 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.55□□□□□ -1.36
HMGCS2P54868 CYCSP1-201ENST00000604815 315 ntBASIC6.55□□□□□ -1.36
HMGCS2P54868 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.55□□□□□ -1.36
HMGCS2P54868 AP001885.1-201ENST00000621658 558 ntBASIC6.55□□□□□ -1.36
HMGCS2P54868 OR52B5P-202ENST00000641118 1110 ntBASIC6.55□□□□□ -1.36
HMGCS2P54868 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
HMGCS2P54868 AC005034.3-201ENST00000604845 1747 ntBASIC6.55□□□□□ -1.36
HMGCS2P54868 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGCS2P54868 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
HMGCS2P54868 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
HMGCS2P54868 PWAR1-201ENST00000624188 2414 ntBASIC6.55□□□□□ -1.36
HMGCS2P54868 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGCS2P54868 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
HMGCS2P54868 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.54□□□□□ -1.36
HMGCS2P54868 AC018809.2-201ENST00000602436 3823 ntBASIC6.54□□□□□ -1.36
HMGCS2P54868 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.54□□□□□ -1.36
HMGCS2P54868 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HMGCS2P54868 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.54□□□□□ -1.36
HMGCS2P54868 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
HMGCS2P54868 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HMGCS2P54868 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.54□□□□□ -1.36
HMGCS2P54868 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.54□□□□□ -1.36
HMGCS2P54868 AC008171.1-201ENST00000395058 200 ntBASIC6.54□□□□□ -1.36
HMGCS2P54868 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.54□□□□□ -1.36
HMGCS2P54868 METTL15P3-201ENST00000415522 1221 ntBASIC6.54□□□□□ -1.36
HMGCS2P54868 RPL6P21-201ENST00000418672 846 ntBASIC6.54□□□□□ -1.36
HMGCS2P54868 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.54□□□□□ -1.36
HMGCS2P54868 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.54□□□□□ -1.36
HMGCS2P54868 RPEP1-201ENST00000504507 658 ntBASIC6.54□□□□□ -1.36
HMGCS2P54868 IGLV3-24-201ENST00000517477 197 ntBASIC6.54□□□□□ -1.36
HMGCS2P54868 AC087360.1-201ENST00000518788 616 ntBASIC6.54□□□□□ -1.36
HMGCS2P54868 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.54□□□□□ -1.36
HMGCS2P54868 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.54□□□□□ -1.36
HMGCS2P54868 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.54□□□□□ -1.36
HMGCS2P54868 AL121612.2-201ENST00000612261 482 ntBASIC6.54□□□□□ -1.36
HMGCS2P54868 AL139407.1-201ENST00000613826 1175 ntBASIC6.54□□□□□ -1.36
HMGCS2P54868 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.54□□□□□ -1.36
HMGCS2P54868 ZNF840P-201ENST00000504759 1996 ntBASIC6.54□□□□□ -1.36
HMGCS2P54868 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
HMGCS2P54868 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.54□□□□□ -1.36
HMGCS2P54868 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
HMGCS2P54868 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
HMGCS2P54868 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
HMGCS2P54868 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HMGCS2P54868 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.54□□□□□ -1.36
HMGCS2P54868 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HMGCS2P54868 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.53□□□□□ -1.36
HMGCS2P54868 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
HMGCS2P54868 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
HMGCS2P54868 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.53□□□□□ -1.36
HMGCS2P54868 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HMGCS2P54868 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HMGCS2P54868 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
HMGCS2P54868 RNA5SP335-201ENST00000363817 110 ntBASIC6.53□□□□□ -1.36
HMGCS2P54868 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
HMGCS2P54868 AL133325.1-201ENST00000421090 382 ntBASIC6.53□□□□□ -1.36
HMGCS2P54868 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.53□□□□□ -1.36
HMGCS2P54868 RPL12P3-201ENST00000440080 396 ntBASIC6.53□□□□□ -1.36
HMGCS2P54868 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.53□□□□□ -1.36
HMGCS2P54868 RPSAP50-201ENST00000481955 852 ntBASIC6.53□□□□□ -1.36
HMGCS2P54868 RPS23P1-201ENST00000491662 432 ntBASIC6.53□□□□□ -1.36
HMGCS2P54868 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.53□□□□□ -1.36
HMGCS2P54868 AC147055.3-201ENST00000510547 851 ntBASIC6.53□□□□□ -1.36
HMGCS2P54868 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.53□□□□□ -1.36
HMGCS2P54868 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.53□□□□□ -1.36
HMGCS2P54868 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.53□□□□□ -1.36
HMGCS2P54868 AC090510.2-201ENST00000617465 629 ntBASIC6.53□□□□□ -1.36
HMGCS2P54868 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.53□□□□□ -1.36
HMGCS2P54868 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.53□□□□□ -1.36
HMGCS2P54868 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.53□□□□□ -1.36
HMGCS2P54868 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
HMGCS2P54868 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
HMGCS2P54868 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
HMGCS2P54868 RAD17P2-201ENST00000451754 1977 ntBASIC6.53□□□□□ -1.36
HMGCS2P54868 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms