Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 HMGB1P42-201ENST00000532126 553 ntBASIC6.18□□□□□ -1.42
CASP4P49662 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.18□□□□□ -1.42
CASP4P49662 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.18□□□□□ -1.42
CASP4P49662 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.18□□□□□ -1.42
CASP4P49662 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.18□□□□□ -1.42
CASP4P49662 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.18□□□□□ -1.42
CASP4P49662 AC015712.7-201ENST00000615211 635 ntBASIC6.18□□□□□ -1.42
CASP4P49662 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.18□□□□□ -1.42
CASP4P49662 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.18□□□□□ -1.42
CASP4P49662 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
CASP4P49662 AC087565.3-203ENST00000641018 837 ntBASIC6.18□□□□□ -1.42
CASP4P49662 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CASP4P49662 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CASP4P49662 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CASP4P49662 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CASP4P49662 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
CASP4P49662 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.18□□□□□ -1.42
CASP4P49662 AC027279.4-201ENST00000624371 2072 ntBASIC6.18□□□□□ -1.42
CASP4P49662 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CASP4P49662 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.17□□□□□ -1.42
CASP4P49662 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CASP4P49662 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CASP4P49662 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CASP4P49662 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.17□□□□□ -1.42
CASP4P49662 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CASP4P49662 AC114774.1-201ENST00000507410 1770 ntBASIC6.17□□□□□ -1.42
CASP4P49662 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.17□□□□□ -1.42
CASP4P49662 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CASP4P49662 GAPDHP24-201ENST00000328713 983 ntBASIC6.17□□□□□ -1.42
CASP4P49662 RNA5SP510-201ENST00000364697 99 ntBASIC6.17□□□□□ -1.42
CASP4P49662 RPL7P58-201ENST00000402913 758 ntBASIC6.17□□□□□ -1.42
CASP4P49662 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.17□□□□□ -1.42
CASP4P49662 AL022331.1-201ENST00000429025 477 ntBASIC6.17□□□□□ -1.42
CASP4P49662 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.17□□□□□ -1.42
CASP4P49662 AC073072.2-201ENST00000447425 348 ntBASIC6.17□□□□□ -1.42
CASP4P49662 AC144530.1-201ENST00000452862 555 ntBASIC6.17□□□□□ -1.42
CASP4P49662 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CASP4P49662 RN7SL284P-201ENST00000498823 275 ntBASIC6.17□□□□□ -1.42
CASP4P49662 RN7SKP253-201ENST00000516424 309 ntBASIC6.17□□□□□ -1.42
CASP4P49662 TRIM51DP-201ENST00000529746 596 ntBASIC6.17□□□□□ -1.42
CASP4P49662 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.17□□□□□ -1.42
CASP4P49662 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.17□□□□□ -1.42
CASP4P49662 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.17□□□□□ -1.42
CASP4P49662 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.17□□□□□ -1.42
CASP4P49662 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.17□□□□□ -1.42
CASP4P49662 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.17□□□□□ -1.42
CASP4P49662 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.17□□□□□ -1.42
CASP4P49662 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
CASP4P49662 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CASP4P49662 AC232271.1-201ENST00000602455 2715 ntBASIC6.17□□□□□ -1.42
CASP4P49662 AC018809.2-201ENST00000602436 3823 ntBASIC6.17□□□□□ -1.42
CASP4P49662 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CASP4P49662 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
CASP4P49662 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.16□□□□□ -1.42
CASP4P49662 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CASP4P49662 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CASP4P49662 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.16□□□□□ -1.42
CASP4P49662 AL591135.1-201ENST00000401578 5914 ntBASIC6.16□□□□□ -1.42
CASP4P49662 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
CASP4P49662 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CASP4P49662 AL121886.1-201ENST00000358609 435 ntBASIC6.16□□□□□ -1.42
CASP4P49662 RN7SKP292-201ENST00000365522 317 ntBASIC6.16□□□□□ -1.42
CASP4P49662 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CASP4P49662 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.16□□□□□ -1.42
CASP4P49662 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.16□□□□□ -1.42
CASP4P49662 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.16□□□□□ -1.42
CASP4P49662 AL662874.1-201ENST00000426065 230 ntBASIC6.16□□□□□ -1.42
CASP4P49662 RPS29P14-201ENST00000431518 171 ntBASIC6.16□□□□□ -1.42
CASP4P49662 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.16□□□□□ -1.42
CASP4P49662 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.16□□□□□ -1.42
CASP4P49662 DNAJC19P5-201ENST00000443295 316 ntBASIC6.16□□□□□ -1.42
CASP4P49662 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.16□□□□□ -1.42
CASP4P49662 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.16□□□□□ -1.42
CASP4P49662 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.16□□□□□ -1.42
CASP4P49662 RPS3AP15-201ENST00000483874 781 ntBASIC6.16□□□□□ -1.42
CASP4P49662 OR7E157P-201ENST00000494376 911 ntBASIC6.16□□□□□ -1.42
CASP4P49662 RPS17P5-201ENST00000498293 408 ntBASIC6.16□□□□□ -1.42
CASP4P49662 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.16□□□□□ -1.42
CASP4P49662 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.16□□□□□ -1.42
CASP4P49662 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.16□□□□□ -1.42
CASP4P49662 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.16□□□□□ -1.42
CASP4P49662 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.16□□□□□ -1.42
CASP4P49662 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.16□□□□□ -1.42
CASP4P49662 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.16□□□□□ -1.42
CASP4P49662 AC090607.5-201ENST00000615692 224 ntBASIC6.16□□□□□ -1.42
CASP4P49662 MIR6861-201ENST00000618657 64 ntBASIC6.16□□□□□ -1.42
CASP4P49662 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CASP4P49662 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.16□□□□□ -1.42
CASP4P49662 MIR193BHG-214ENST00000641765 509 ntBASIC6.16□□□□□ -1.42
CASP4P49662 AC079776.5-201ENST00000641920 211 ntBASIC6.16□□□□□ -1.42
CASP4P49662 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
CASP4P49662 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CASP4P49662 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CASP4P49662 HSPD1P7-201ENST00000447985 1686 ntBASIC6.16□□□□□ -1.42
CASP4P49662 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.16□□□□□ -1.42
CASP4P49662 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CASP4P49662 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.16□□□□□ -1.42
CASP4P49662 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.16□□□□□ -1.42
CASP4P49662 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CASP4P49662 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms