Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CTNNA1P35221 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CTNNA1P35221 RPL11P3-201ENST00000395256 523 ntBASIC6.16□□□□□ -1.42
CTNNA1P35221 RPL35AP3-201ENST00000414680 288 ntBASIC6.16□□□□□ -1.42
CTNNA1P35221 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.16□□□□□ -1.42
CTNNA1P35221 RPS4XP5-201ENST00000419038 768 ntBASIC6.16□□□□□ -1.42
CTNNA1P35221 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.16□□□□□ -1.42
CTNNA1P35221 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.16□□□□□ -1.42
CTNNA1P35221 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CTNNA1P35221 AC023141.3-201ENST00000436698 278 ntBASIC6.16□□□□□ -1.42
CTNNA1P35221 RPL12P49-201ENST00000441100 121 ntBASIC6.16□□□□□ -1.42
CTNNA1P35221 AL445466.1-201ENST00000448432 357 ntBASIC6.16□□□□□ -1.42
CTNNA1P35221 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.16□□□□□ -1.42
CTNNA1P35221 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.16□□□□□ -1.42
CTNNA1P35221 PPIAP7-201ENST00000454070 489 ntBASIC6.16□□□□□ -1.42
CTNNA1P35221 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.16□□□□□ -1.42
CTNNA1P35221 AC107015.1-201ENST00000466902 747 ntBASIC6.16□□□□□ -1.42
CTNNA1P35221 AC023245.1-201ENST00000468501 517 ntBASIC6.16□□□□□ -1.42
CTNNA1P35221 AP002453.1-201ENST00000492327 668 ntBASIC6.16□□□□□ -1.42
CTNNA1P35221 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.16□□□□□ -1.42
CTNNA1P35221 OR7E99P-201ENST00000505750 922 ntBASIC6.16□□□□□ -1.42
CTNNA1P35221 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.16□□□□□ -1.42
CTNNA1P35221 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.16□□□□□ -1.42
CTNNA1P35221 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.16□□□□□ -1.42
CTNNA1P35221 CASP1P2-201ENST00000526830 1258 ntBASIC6.16□□□□□ -1.42
CTNNA1P35221 AP000620.1-201ENST00000527147 504 ntBASIC6.16□□□□□ -1.42
CTNNA1P35221 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.16□□□□□ -1.42
CTNNA1P35221 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.16□□□□□ -1.42
CTNNA1P35221 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CTNNA1P35221 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.16□□□□□ -1.42
CTNNA1P35221 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.16□□□□□ -1.42
CTNNA1P35221 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CTNNA1P35221 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.16□□□□□ -1.42
CTNNA1P35221 TXNP4-201ENST00000575018 310 ntBASIC6.16□□□□□ -1.42
CTNNA1P35221 AC138473.1-201ENST00000605717 526 ntBASIC6.16□□□□□ -1.42
CTNNA1P35221 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.16□□□□□ -1.42
CTNNA1P35221 AC073389.3-201ENST00000609434 935 ntBASIC6.16□□□□□ -1.42
CTNNA1P35221 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.16□□□□□ -1.42
CTNNA1P35221 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CTNNA1P35221 AL138693.1-201ENST00000622219 129 ntBASIC6.16□□□□□ -1.42
CTNNA1P35221 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.16□□□□□ -1.42
CTNNA1P35221 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.16□□□□□ -1.42
CTNNA1P35221 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CTNNA1P35221 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CTNNA1P35221 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CTNNA1P35221 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CTNNA1P35221 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CTNNA1P35221 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.15□□□□□ -1.42
CTNNA1P35221 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.15□□□□□ -1.42
CTNNA1P35221 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
CTNNA1P35221 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CTNNA1P35221 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.15□□□□□ -1.42
CTNNA1P35221 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.15□□□□□ -1.42
CTNNA1P35221 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CTNNA1P35221 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.15□□□□□ -1.42
CTNNA1P35221 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.15□□□□□ -1.42
CTNNA1P35221 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CTNNA1P35221 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
CTNNA1P35221 RNU6-249P-201ENST00000363016 102 ntBASIC6.15□□□□□ -1.42
CTNNA1P35221 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.15□□□□□ -1.42
CTNNA1P35221 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.15□□□□□ -1.42
CTNNA1P35221 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CTNNA1P35221 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.15□□□□□ -1.42
CTNNA1P35221 MGAT2P2-201ENST00000427194 797 ntBASIC6.15□□□□□ -1.42
CTNNA1P35221 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.15□□□□□ -1.42
CTNNA1P35221 RPSAP65-201ENST00000429660 595 ntBASIC6.15□□□□□ -1.42
CTNNA1P35221 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.15□□□□□ -1.42
CTNNA1P35221 MTND2P40-201ENST00000436718 841 ntBASIC6.15□□□□□ -1.42
CTNNA1P35221 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.15□□□□□ -1.42
CTNNA1P35221 AC010240.2-201ENST00000445363 1205 ntBASIC6.15□□□□□ -1.42
CTNNA1P35221 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.15□□□□□ -1.42
CTNNA1P35221 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CTNNA1P35221 GLUD1P3-202ENST00000508551 200 ntBASIC6.15□□□□□ -1.42
CTNNA1P35221 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.15□□□□□ -1.42
CTNNA1P35221 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.15□□□□□ -1.42
CTNNA1P35221 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.15□□□□□ -1.42
CTNNA1P35221 AP000619.2-201ENST00000546014 969 ntBASIC6.15□□□□□ -1.42
CTNNA1P35221 AL078601.3-201ENST00000573303 535 ntBASIC6.15□□□□□ -1.42
CTNNA1P35221 AC012254.3-201ENST00000591183 2117 ntBASIC6.15□□□□□ -1.42
CTNNA1P35221 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CTNNA1P35221 AC068768.2-201ENST00000602352 343 ntBASIC6.15□□□□□ -1.42
CTNNA1P35221 AC073333.2-201ENST00000603589 769 ntBASIC6.15□□□□□ -1.42
CTNNA1P35221 AC117490.2-201ENST00000610042 594 ntBASIC6.15□□□□□ -1.42
CTNNA1P35221 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.42
CTNNA1P35221 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.15□□□□□ -1.42
CTNNA1P35221 AC073488.3-201ENST00000631611 778 ntBASIC6.15□□□□□ -1.42
CTNNA1P35221 AC073488.6-201ENST00000632293 754 ntBASIC6.15□□□□□ -1.42
CTNNA1P35221 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CTNNA1P35221 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CTNNA1P35221 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
CTNNA1P35221 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CTNNA1P35221 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CTNNA1P35221 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
CTNNA1P35221 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.15□□□□□ -1.43
CTNNA1P35221 AL034546.1-201ENST00000623740 3693 ntBASIC6.15□□□□□ -1.43
CTNNA1P35221 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
CTNNA1P35221 RBPJP7-201ENST00000442803 1447 ntBASIC6.15□□□□□ -1.43
CTNNA1P35221 RBPJP5-201ENST00000449433 1447 ntBASIC6.15□□□□□ -1.43
CTNNA1P35221 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CTNNA1P35221 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms