Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
USF1P22415 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
USF1P22415 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.03□□□□□ -1.6
USF1P22415 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.03□□□□□ -1.6
USF1P22415 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
USF1P22415 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
USF1P22415 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.03□□□□□ -1.6
USF1P22415 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
USF1P22415 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
USF1P22415 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.03□□□□□ -1.6
USF1P22415 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.03□□□□□ -1.6
USF1P22415 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.02□□□□□ -1.61
USF1P22415 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
USF1P22415 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
USF1P22415 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USF1P22415 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
USF1P22415 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USF1P22415 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.02□□□□□ -1.61
USF1P22415 AP001541.1-201ENST00000623322 1904 ntBASIC5.02□□□□□ -1.61
USF1P22415 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
USF1P22415 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.02□□□□□ -1.61
USF1P22415 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.02□□□□□ -1.61
USF1P22415 RPL23AP17-201ENST00000401064 499 ntBASIC5.02□□□□□ -1.61
USF1P22415 AL121835.1-201ENST00000404250 354 ntBASIC5.02□□□□□ -1.61
USF1P22415 AC016739.1-201ENST00000405359 345 ntBASIC5.02□□□□□ -1.61
USF1P22415 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.02□□□□□ -1.61
USF1P22415 OR2AT2P-201ENST00000413438 905 ntBASIC5.02□□□□□ -1.61
USF1P22415 AL354890.1-201ENST00000413730 346 ntBASIC5.02□□□□□ -1.61
USF1P22415 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.02□□□□□ -1.61
USF1P22415 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.02□□□□□ -1.61
USF1P22415 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.02□□□□□ -1.61
USF1P22415 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.02□□□□□ -1.61
USF1P22415 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.02□□□□□ -1.61
USF1P22415 AC126120.1-201ENST00000431082 470 ntBASIC5.02□□□□□ -1.61
USF1P22415 BMS1P10-201ENST00000443754 1120 ntBASIC5.02□□□□□ -1.61
USF1P22415 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.02□□□□□ -1.61
USF1P22415 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.02□□□□□ -1.61
USF1P22415 MYO5BP2-201ENST00000449815 1277 ntBASIC5.02□□□□□ -1.61
USF1P22415 AC026348.1-201ENST00000462549 1053 ntBASIC5.02□□□□□ -1.61
USF1P22415 RN7SL269P-201ENST00000467795 305 ntBASIC5.02□□□□□ -1.61
USF1P22415 RN7SL57P-201ENST00000493687 290 ntBASIC5.02□□□□□ -1.61
USF1P22415 RPS26P24-201ENST00000497656 331 ntBASIC5.02□□□□□ -1.61
USF1P22415 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.02□□□□□ -1.61
USF1P22415 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
USF1P22415 ATP5LP3-201ENST00000514223 304 ntBASIC5.02□□□□□ -1.61
USF1P22415 CYP4F27P-201ENST00000514557 494 ntBASIC5.02□□□□□ -1.61
USF1P22415 RNU6-1334P-201ENST00000516032 105 ntBASIC5.02□□□□□ -1.61
USF1P22415 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.02□□□□□ -1.61
USF1P22415 OR6M2P-201ENST00000529831 871 ntBASIC5.02□□□□□ -1.61
USF1P22415 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.02□□□□□ -1.61
USF1P22415 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.02□□□□□ -1.61
USF1P22415 AL356801.1-201ENST00000559320 294 ntBASIC5.02□□□□□ -1.61
USF1P22415 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.02□□□□□ -1.61
USF1P22415 AC010547.6-201ENST00000571789 193 ntBASIC5.02□□□□□ -1.61
USF1P22415 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.02□□□□□ -1.61
USF1P22415 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.02□□□□□ -1.61
USF1P22415 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USF1P22415 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
USF1P22415 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.02□□□□□ -1.61
USF1P22415 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
USF1P22415 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USF1P22415 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
USF1P22415 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
USF1P22415 PDZK1P1-202ENST00000425209 1350 ntBASIC5.02□□□□□ -1.61
USF1P22415 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.02□□□□□ -1.61
USF1P22415 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
USF1P22415 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
USF1P22415 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
USF1P22415 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USF1P22415 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
USF1P22415 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.01□□□□□ -1.61
USF1P22415 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
USF1P22415 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
USF1P22415 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.01□□□□□ -1.61
USF1P22415 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.01□□□□□ -1.61
USF1P22415 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.01□□□□□ -1.61
USF1P22415 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USF1P22415 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
USF1P22415 AC119674.1-202ENST00000641333 1860 ntBASIC5.01□□□□□ -1.61
USF1P22415 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USF1P22415 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
USF1P22415 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USF1P22415 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
USF1P22415 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.01□□□□□ -1.61
USF1P22415 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
USF1P22415 RNU11-201ENST00000387069 134 ntBASIC5.01□□□□□ -1.61
USF1P22415 NPM1P37-201ENST00000403105 874 ntBASIC5.01□□□□□ -1.61
USF1P22415 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.01□□□□□ -1.61
USF1P22415 RPL35AP3-201ENST00000414680 288 ntBASIC5.01□□□□□ -1.61
USF1P22415 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.01□□□□□ -1.61
USF1P22415 MRPS21P2-201ENST00000424704 264 ntBASIC5.01□□□□□ -1.61
USF1P22415 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
USF1P22415 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.01□□□□□ -1.61
USF1P22415 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.01□□□□□ -1.61
USF1P22415 RAB28P2-201ENST00000454299 641 ntBASIC5.01□□□□□ -1.61
USF1P22415 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.01□□□□□ -1.61
USF1P22415 SLC25A51P1-201ENST00000468432 871 ntBASIC5.01□□□□□ -1.61
USF1P22415 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
USF1P22415 AC109481.1-201ENST00000509173 282 ntBASIC5.01□□□□□ -1.61
USF1P22415 ASNSP4-201ENST00000511103 447 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms