Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TOP1P11387 AL159987.1-201ENST00000347911 293 ntBASIC6.76□□□□□ -1.33
TOP1P11387 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
TOP1P11387 RNU11-201ENST00000387069 134 ntBASIC6.76□□□□□ -1.33
TOP1P11387 RN7SKP286-201ENST00000410894 299 ntBASIC6.76□□□□□ -1.33
TOP1P11387 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.76□□□□□ -1.33
TOP1P11387 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.76□□□□□ -1.33
TOP1P11387 FRG2FP-204ENST00000453982 852 ntBASIC6.76□□□□□ -1.33
TOP1P11387 AC093719.1-201ENST00000480427 441 ntBASIC6.76□□□□□ -1.33
TOP1P11387 AC006539.1-201ENST00000481419 501 ntBASIC6.76□□□□□ -1.33
TOP1P11387 RPL32P33-201ENST00000487023 394 ntBASIC6.76□□□□□ -1.33
TOP1P11387 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.76□□□□□ -1.33
TOP1P11387 RN7SL101P-201ENST00000496350 279 ntBASIC6.76□□□□□ -1.33
TOP1P11387 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.76□□□□□ -1.33
TOP1P11387 TMEM97P2-201ENST00000517841 403 ntBASIC6.76□□□□□ -1.33
TOP1P11387 AC021678.3-201ENST00000517893 476 ntBASIC6.76□□□□□ -1.33
TOP1P11387 HMGB1P42-201ENST00000532126 553 ntBASIC6.76□□□□□ -1.33
TOP1P11387 AL121594.2-201ENST00000541658 472 ntBASIC6.76□□□□□ -1.33
TOP1P11387 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.76□□□□□ -1.33
TOP1P11387 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.76□□□□□ -1.33
TOP1P11387 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.76□□□□□ -1.33
TOP1P11387 AC096996.1-201ENST00000563813 325 ntBASIC6.76□□□□□ -1.33
TOP1P11387 AC006115.2-201ENST00000596823 202 ntBASIC6.76□□□□□ -1.33
TOP1P11387 AL360012.1-201ENST00000602813 131 ntBASIC6.76□□□□□ -1.33
TOP1P11387 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.76□□□□□ -1.33
TOP1P11387 RN7SL787P-201ENST00000613000 284 ntBASIC6.76□□□□□ -1.33
TOP1P11387 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.76□□□□□ -1.33
TOP1P11387 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TOP1P11387 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TOP1P11387 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.76□□□□□ -1.33
TOP1P11387 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.76□□□□□ -1.33
TOP1P11387 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TOP1P11387 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TOP1P11387 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TOP1P11387 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
TOP1P11387 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.75□□□□□ -1.33
TOP1P11387 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.75□□□□□ -1.33
TOP1P11387 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
TOP1P11387 AC087516.1-201ENST00000561236 2428 ntBASIC6.75□□□□□ -1.33
TOP1P11387 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TOP1P11387 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TOP1P11387 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.75□□□□□ -1.33
TOP1P11387 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
TOP1P11387 RN7SKP206-201ENST00000410823 293 ntBASIC6.75□□□□□ -1.33
TOP1P11387 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.75□□□□□ -1.33
TOP1P11387 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.75□□□□□ -1.33
TOP1P11387 AC073410.1-201ENST00000435125 589 ntBASIC6.75□□□□□ -1.33
TOP1P11387 AP000281.1-201ENST00000444036 316 ntBASIC6.75□□□□□ -1.33
TOP1P11387 AC079080.1-201ENST00000479841 822 ntBASIC6.75□□□□□ -1.33
TOP1P11387 RN7SL570P-201ENST00000484405 292 ntBASIC6.75□□□□□ -1.33
TOP1P11387 AC027544.3-201ENST00000535082 757 ntBASIC6.75□□□□□ -1.33
TOP1P11387 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.75□□□□□ -1.33
TOP1P11387 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.75□□□□□ -1.33
TOP1P11387 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.75□□□□□ -1.33
TOP1P11387 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.75□□□□□ -1.33
TOP1P11387 AP001357.1-201ENST00000586304 1053 ntBASIC6.75□□□□□ -1.33
TOP1P11387 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.75□□□□□ -1.33
TOP1P11387 MIR6862-1-201ENST00000613016 70 ntBASIC6.75□□□□□ -1.33
TOP1P11387 MIR6862-2-201ENST00000614755 70 ntBASIC6.75□□□□□ -1.33
TOP1P11387 AC069542.2-201ENST00000624816 216 ntBASIC6.75□□□□□ -1.33
TOP1P11387 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
TOP1P11387 AC020656.2-201ENST00000613291 5309 ntBASIC6.75□□□□□ -1.33
TOP1P11387 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TOP1P11387 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
TOP1P11387 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TOP1P11387 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TOP1P11387 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TOP1P11387 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TOP1P11387 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TOP1P11387 AP004607.3-201ENST00000530354 3915 ntBASIC6.75□□□□□ -1.33
TOP1P11387 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.74□□□□□ -1.33
TOP1P11387 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TOP1P11387 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TOP1P11387 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.74□□□□□ -1.33
TOP1P11387 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
TOP1P11387 AC025470.1-201ENST00000510053 2032 ntBASIC6.74□□□□□ -1.33
TOP1P11387 AC005261.2-201ENST00000593427 4258 ntBASIC6.74□□□□□ -1.33
TOP1P11387 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TOP1P11387 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.74□□□□□ -1.33
TOP1P11387 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.74□□□□□ -1.33
TOP1P11387 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
TOP1P11387 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
TOP1P11387 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
TOP1P11387 SNORA64.1-201ENST00000362600 132 ntBASIC6.74□□□□□ -1.33
TOP1P11387 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TOP1P11387 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.74□□□□□ -1.33
TOP1P11387 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.74□□□□□ -1.33
TOP1P11387 CHEK2P5-201ENST00000423877 246 ntBASIC6.74□□□□□ -1.33
TOP1P11387 AL662874.1-201ENST00000426065 230 ntBASIC6.74□□□□□ -1.33
TOP1P11387 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.74□□□□□ -1.33
TOP1P11387 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.74□□□□□ -1.33
TOP1P11387 KRT8P51-201ENST00000438938 274 ntBASIC6.74□□□□□ -1.33
TOP1P11387 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.74□□□□□ -1.33
TOP1P11387 OR7E157P-201ENST00000494376 911 ntBASIC6.74□□□□□ -1.33
TOP1P11387 AC105384.2-201ENST00000508433 640 ntBASIC6.74□□□□□ -1.33
TOP1P11387 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.74□□□□□ -1.33
TOP1P11387 AC074255.1-201ENST00000511259 501 ntBASIC6.74□□□□□ -1.33
TOP1P11387 RNU6-615P-201ENST00000516065 106 ntBASIC6.74□□□□□ -1.33
TOP1P11387 AC078899.1-201ENST00000521432 1185 ntBASIC6.74□□□□□ -1.33
TOP1P11387 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms