Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
HOXC6P09630 AL031123.3-201ENST00000623345 1837 ntBASIC6.55□□□□□ -1.36
HOXC6P09630 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HOXC6P09630 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HOXC6P09630 AC009779.8-201ENST00000641684 4384 ntBASIC6.55□□□□□ -1.36
HOXC6P09630 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
HOXC6P09630 AL121768.1-201ENST00000613917 2544 ntBASIC6.54□□□□□ -1.36
HOXC6P09630 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC6P09630 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC6P09630 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC6P09630 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
HOXC6P09630 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.54□□□□□ -1.36
HOXC6P09630 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
HOXC6P09630 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
HOXC6P09630 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC6P09630 RNA5SP319-201ENST00000362768 119 ntBASIC6.54□□□□□ -1.36
HOXC6P09630 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
HOXC6P09630 OR2W4P-201ENST00000406496 926 ntBASIC6.54□□□□□ -1.36
HOXC6P09630 RPL23AP27-201ENST00000415161 451 ntBASIC6.54□□□□□ -1.36
HOXC6P09630 RPS17P17-201ENST00000419392 409 ntBASIC6.54□□□□□ -1.36
HOXC6P09630 NENFP1-201ENST00000419476 466 ntBASIC6.54□□□□□ -1.36
HOXC6P09630 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.54□□□□□ -1.36
HOXC6P09630 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.54□□□□□ -1.36
HOXC6P09630 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.54□□□□□ -1.36
HOXC6P09630 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.54□□□□□ -1.36
HOXC6P09630 RPL38P3-201ENST00000484463 213 ntBASIC6.54□□□□□ -1.36
HOXC6P09630 AC073610.1-201ENST00000489971 396 ntBASIC6.54□□□□□ -1.36
HOXC6P09630 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.54□□□□□ -1.36
HOXC6P09630 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.54□□□□□ -1.36
HOXC6P09630 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
HOXC6P09630 TMF1P1-201ENST00000576058 373 ntBASIC6.54□□□□□ -1.36
HOXC6P09630 AL136295.6-201ENST00000610486 658 ntBASIC6.54□□□□□ -1.36
HOXC6P09630 AL355974.3-201ENST00000617383 467 ntBASIC6.54□□□□□ -1.36
HOXC6P09630 AL109620.1-201ENST00000618738 1197 ntBASIC6.54□□□□□ -1.36
HOXC6P09630 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC6P09630 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.54□□□□□ -1.36
HOXC6P09630 AL161756.3-201ENST00000641216 2071 ntBASIC6.54□□□□□ -1.36
HOXC6P09630 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC6P09630 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC6P09630 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC6P09630 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
HOXC6P09630 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC6P09630 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC6P09630 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
HOXC6P09630 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
HOXC6P09630 MTCO1P46-201ENST00000451639 1491 ntBASIC6.53□□□□□ -1.36
HOXC6P09630 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
HOXC6P09630 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXC6P09630 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.53□□□□□ -1.36
HOXC6P09630 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.53□□□□□ -1.36
HOXC6P09630 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC6P09630 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
HOXC6P09630 AC007938.2-201ENST00000604666 2634 ntBASIC6.53□□□□□ -1.36
HOXC6P09630 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
HOXC6P09630 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC6P09630 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC6P09630 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
HOXC6P09630 GABARAPL3-201ENST00000412799 354 ntBASIC6.53□□□□□ -1.36
HOXC6P09630 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXC6P09630 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC6P09630 AC016027.5-201ENST00000427227 210 ntBASIC6.53□□□□□ -1.36
HOXC6P09630 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXC6P09630 CYCSP12-201ENST00000437729 300 ntBASIC6.53□□□□□ -1.36
HOXC6P09630 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.53□□□□□ -1.36
HOXC6P09630 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.53□□□□□ -1.36
HOXC6P09630 AC017099.1-201ENST00000448261 1028 ntBASIC6.53□□□□□ -1.36
HOXC6P09630 AL162739.1-201ENST00000450606 307 ntBASIC6.53□□□□□ -1.36
HOXC6P09630 AC079841.1-201ENST00000481228 950 ntBASIC6.53□□□□□ -1.36
HOXC6P09630 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC6.53□□□□□ -1.36
HOXC6P09630 AC090638.1-201ENST00000498296 909 ntBASIC6.53□□□□□ -1.36
HOXC6P09630 MTND2P31-201ENST00000512602 616 ntBASIC6.53□□□□□ -1.36
HOXC6P09630 AC021146.10-201ENST00000515628 706 ntBASIC6.53□□□□□ -1.36
HOXC6P09630 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.53□□□□□ -1.36
HOXC6P09630 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.53□□□□□ -1.36
HOXC6P09630 AC126615.2-201ENST00000553003 515 ntBASIC6.53□□□□□ -1.36
HOXC6P09630 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXC6P09630 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC6P09630 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.53□□□□□ -1.36
HOXC6P09630 AC115989.2-201ENST00000578640 563 ntBASIC6.53□□□□□ -1.36
HOXC6P09630 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXC6P09630 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC6P09630 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC6P09630 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXC6P09630 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXC6P09630 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC6P09630 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
HOXC6P09630 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC6P09630 AC007342.9-201ENST00000623877 1385 ntBASIC6.53□□□□□ -1.36
HOXC6P09630 AL137141.1-201ENST00000624622 4836 ntBASIC6.53□□□□□ -1.36
HOXC6P09630 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXC6P09630 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXC6P09630 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXC6P09630 AC087516.1-201ENST00000561236 2428 ntBASIC6.52□□□□□ -1.36
HOXC6P09630 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.36
HOXC6P09630 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.36
HOXC6P09630 AC079753.1-201ENST00000623243 3868 ntBASIC6.52□□□□□ -1.36
HOXC6P09630 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
HOXC6P09630 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.36
HOXC6P09630 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXC6P09630 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms