Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RBM22P1-201ENST00000578589 1214 ntBASIC5.27□□□□□ -1.57
SPTA1P02549 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SPTA1P02549 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.27□□□□□ -1.57
SPTA1P02549 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SPTA1P02549 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SPTA1P02549 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SPTA1P02549 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SPTA1P02549 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SPTA1P02549 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
SPTA1P02549 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SPTA1P02549 AC096921.2-201ENST00000561507 1916 ntBASIC5.27□□□□□ -1.57
SPTA1P02549 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SPTA1P02549 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SPTA1P02549 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC5.27□□□□□ -1.57
SPTA1P02549 AC005294.1-201ENST00000355509 281 ntBASIC5.27□□□□□ -1.57
SPTA1P02549 AL133388.1-201ENST00000404509 287 ntBASIC5.27□□□□□ -1.57
SPTA1P02549 LINC01881-201ENST00000416103 412 ntBASIC5.27□□□□□ -1.57
SPTA1P02549 AL049745.1-201ENST00000433953 286 ntBASIC5.27□□□□□ -1.57
SPTA1P02549 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.27□□□□□ -1.57
SPTA1P02549 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.27□□□□□ -1.57
SPTA1P02549 AC114728.1-201ENST00000488289 483 ntBASIC5.27□□□□□ -1.57
SPTA1P02549 RPL21P129-201ENST00000491732 478 ntBASIC5.27□□□□□ -1.57
SPTA1P02549 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.27□□□□□ -1.57
SPTA1P02549 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.27□□□□□ -1.57
SPTA1P02549 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.27□□□□□ -1.57
SPTA1P02549 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.27□□□□□ -1.57
SPTA1P02549 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.27□□□□□ -1.57
SPTA1P02549 MIR3934-201ENST00000579806 107 ntBASIC5.27□□□□□ -1.57
SPTA1P02549 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SPTA1P02549 AC145423.1-201ENST00000605712 336 ntBASIC5.27□□□□□ -1.57
SPTA1P02549 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.27□□□□□ -1.57
SPTA1P02549 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC5.27□□□□□ -1.57
SPTA1P02549 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SPTA1P02549 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
SPTA1P02549 AP002370.1-201ENST00000528055 1602 ntBASIC5.27□□□□□ -1.57
SPTA1P02549 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SPTA1P02549 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SPTA1P02549 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.27□□□□□ -1.57
SPTA1P02549 CLCA3P-203ENST00000490028 2781 ntBASIC5.27□□□□□ -1.57
SPTA1P02549 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SPTA1P02549 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.27□□□□□ -1.57
SPTA1P02549 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SPTA1P02549 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.27□□□□□ -1.57
SPTA1P02549 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.27□□□□□ -1.57
SPTA1P02549 AC091046.3-201ENST00000631455 1574 ntBASIC5.26□□□□□ -1.57
SPTA1P02549 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC5.26□□□□□ -1.57
SPTA1P02549 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SPTA1P02549 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SPTA1P02549 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
SPTA1P02549 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SPTA1P02549 RNA5SP131-201ENST00000365452 119 ntBASIC5.26□□□□□ -1.57
SPTA1P02549 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.26□□□□□ -1.57
SPTA1P02549 OR5M12P-201ENST00000423388 929 ntBASIC5.26□□□□□ -1.57
SPTA1P02549 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.26□□□□□ -1.57
SPTA1P02549 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SPTA1P02549 RPS7P3-201ENST00000443360 580 ntBASIC5.26□□□□□ -1.57
SPTA1P02549 BZW1P1-201ENST00000454901 1240 ntBASIC5.26□□□□□ -1.57
SPTA1P02549 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
SPTA1P02549 PGAM1P13-201ENST00000507497 754 ntBASIC5.26□□□□□ -1.57
SPTA1P02549 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.26□□□□□ -1.57
SPTA1P02549 AC068790.4-201ENST00000602474 263 ntBASIC5.26□□□□□ -1.57
SPTA1P02549 MIR6758-201ENST00000620653 63 ntBASIC5.26□□□□□ -1.57
SPTA1P02549 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.26□□□□□ -1.57
SPTA1P02549 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.26□□□□□ -1.57
SPTA1P02549 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SPTA1P02549 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SPTA1P02549 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SPTA1P02549 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.26□□□□□ -1.57
SPTA1P02549 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
SPTA1P02549 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SPTA1P02549 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SPTA1P02549 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.26□□□□□ -1.57
SPTA1P02549 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SPTA1P02549 AC013488.1-201ENST00000526618 1838 ntBASIC5.26□□□□□ -1.57
SPTA1P02549 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC5.26□□□□□ -1.57
SPTA1P02549 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SPTA1P02549 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SPTA1P02549 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SPTA1P02549 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.26□□□□□ -1.57
SPTA1P02549 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SPTA1P02549 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.26□□□□□ -1.57
SPTA1P02549 RPS29P33-201ENST00000456717 146 ntBASIC5.26□□□□□ -1.57
SPTA1P02549 ACA64.4-201ENST00000459070 127 ntBASIC5.26□□□□□ -1.57
SPTA1P02549 AC092324.1-201ENST00000468671 324 ntBASIC5.26□□□□□ -1.57
SPTA1P02549 AL161747.1-201ENST00000480068 358 ntBASIC5.26□□□□□ -1.57
SPTA1P02549 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.26□□□□□ -1.57
SPTA1P02549 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SPTA1P02549 CCDC58P3-201ENST00000590792 430 ntBASIC5.26□□□□□ -1.57
SPTA1P02549 AC006116.3-201ENST00000592968 361 ntBASIC5.26□□□□□ -1.57
SPTA1P02549 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.26□□□□□ -1.57
SPTA1P02549 AC005084.1-201ENST00000605160 304 ntBASIC5.26□□□□□ -1.57
SPTA1P02549 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
SPTA1P02549 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SPTA1P02549 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SPTA1P02549 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SPTA1P02549 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SPTA1P02549 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
SPTA1P02549 IMMTP1-201ENST00000435590 2219 ntBASIC5.25□□□□□ -1.57
SPTA1P02549 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.25□□□□□ -1.57
SPTA1P02549 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms