Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 TAS2R6P-201ENST00000605022 826 ntBASIC6.78□□□□□ -1.32
COL1A1P02452 AC132068.1-201ENST00000623805 459 ntBASIC6.78□□□□□ -1.32
COL1A1P02452 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL1A1P02452 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.78□□□□□ -1.32
COL1A1P02452 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
COL1A1P02452 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.78□□□□□ -1.32
COL1A1P02452 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.78□□□□□ -1.32
COL1A1P02452 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC6.77□□□□□ -1.32
COL1A1P02452 AL034546.1-201ENST00000623740 3693 ntBASIC6.77□□□□□ -1.32
COL1A1P02452 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.77□□□□□ -1.32
COL1A1P02452 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.77□□□□□ -1.33
COL1A1P02452 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
COL1A1P02452 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL1A1P02452 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.77□□□□□ -1.33
COL1A1P02452 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL1A1P02452 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL1A1P02452 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL1A1P02452 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
COL1A1P02452 SNORD1C-201ENST00000363315 78 ntBASIC6.77□□□□□ -1.33
COL1A1P02452 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL1A1P02452 AC005042.1-201ENST00000393397 800 ntBASIC6.77□□□□□ -1.33
COL1A1P02452 Y_RNA.625-201ENST00000411256 107 ntBASIC6.77□□□□□ -1.33
COL1A1P02452 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.77□□□□□ -1.33
COL1A1P02452 OR52B5P-201ENST00000435337 951 ntBASIC6.77□□□□□ -1.33
COL1A1P02452 AC245047.2-201ENST00000441060 530 ntBASIC6.77□□□□□ -1.33
COL1A1P02452 H2AFZP6-201ENST00000444403 394 ntBASIC6.77□□□□□ -1.33
COL1A1P02452 CBX1P5-201ENST00000475330 559 ntBASIC6.77□□□□□ -1.33
COL1A1P02452 AC079080.1-201ENST00000479841 822 ntBASIC6.77□□□□□ -1.33
COL1A1P02452 RPSAP50-201ENST00000481955 852 ntBASIC6.77□□□□□ -1.33
COL1A1P02452 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.77□□□□□ -1.33
COL1A1P02452 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.77□□□□□ -1.33
COL1A1P02452 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL1A1P02452 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.77□□□□□ -1.33
COL1A1P02452 AL445222.1-201ENST00000607259 628 ntBASIC6.77□□□□□ -1.33
COL1A1P02452 Mico1.1-201ENST00000611698 204 ntBASIC6.77□□□□□ -1.33
COL1A1P02452 OR52B5P-202ENST00000641118 1110 ntBASIC6.77□□□□□ -1.33
COL1A1P02452 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.77□□□□□ -1.33
COL1A1P02452 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL1A1P02452 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.77□□□□□ -1.33
COL1A1P02452 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL1A1P02452 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL1A1P02452 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.77□□□□□ -1.33
COL1A1P02452 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
COL1A1P02452 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.76□□□□□ -1.33
COL1A1P02452 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC6.76□□□□□ -1.33
COL1A1P02452 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
COL1A1P02452 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.76□□□□□ -1.33
COL1A1P02452 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL1A1P02452 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
COL1A1P02452 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL1A1P02452 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL1A1P02452 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
COL1A1P02452 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL1A1P02452 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL1A1P02452 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.76□□□□□ -1.33
COL1A1P02452 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
COL1A1P02452 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL1A1P02452 SNORA70.9-201ENST00000384370 135 ntBASIC6.76□□□□□ -1.33
COL1A1P02452 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
COL1A1P02452 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.76□□□□□ -1.33
COL1A1P02452 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.76□□□□□ -1.33
COL1A1P02452 AC005033.1-201ENST00000428904 813 ntBASIC6.76□□□□□ -1.33
COL1A1P02452 RPL7L1P9-201ENST00000431298 745 ntBASIC6.76□□□□□ -1.33
COL1A1P02452 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.76□□□□□ -1.33
COL1A1P02452 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.76□□□□□ -1.33
COL1A1P02452 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.76□□□□□ -1.33
COL1A1P02452 BX284632.1-201ENST00000478218 541 ntBASIC6.76□□□□□ -1.33
COL1A1P02452 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.76□□□□□ -1.33
COL1A1P02452 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.76□□□□□ -1.33
COL1A1P02452 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.76□□□□□ -1.33
COL1A1P02452 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.76□□□□□ -1.33
COL1A1P02452 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.76□□□□□ -1.33
COL1A1P02452 AGGF1P7-201ENST00000562369 913 ntBASIC6.76□□□□□ -1.33
COL1A1P02452 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.76□□□□□ -1.33
COL1A1P02452 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.76□□□□□ -1.33
COL1A1P02452 SETP3-201ENST00000581726 813 ntBASIC6.76□□□□□ -1.33
COL1A1P02452 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.76□□□□□ -1.33
COL1A1P02452 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.76□□□□□ -1.33
COL1A1P02452 HIRAP1-201ENST00000605318 787 ntBASIC6.76□□□□□ -1.33
COL1A1P02452 AC126915.2-201ENST00000610957 190 ntBASIC6.76□□□□□ -1.33
COL1A1P02452 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.76□□□□□ -1.33
COL1A1P02452 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL1A1P02452 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
COL1A1P02452 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.76□□□□□ -1.33
COL1A1P02452 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL1A1P02452 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
COL1A1P02452 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.76□□□□□ -1.33
COL1A1P02452 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL1A1P02452 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
COL1A1P02452 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL1A1P02452 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL1A1P02452 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL1A1P02452 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL1A1P02452 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL1A1P02452 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL1A1P02452 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
COL1A1P02452 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL1A1P02452 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL1A1P02452 RNU4-64P-201ENST00000410795 131 ntBASIC6.75□□□□□ -1.33
COL1A1P02452 AL390774.1-201ENST00000411924 246 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms