Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TNFP01375 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TNFP01375 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFP01375 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TNFP01375 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFP01375 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
TNFP01375 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
TNFP01375 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFP01375 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.57□□□□□ -1.52
TNFP01375 HSPD1P8-201ENST00000400121 1658 ntBASIC5.57□□□□□ -1.52
TNFP01375 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFP01375 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.57□□□□□ -1.52
TNFP01375 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFP01375 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFP01375 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFP01375 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFP01375 RNA5SP319-201ENST00000362768 119 ntBASIC5.57□□□□□ -1.52
TNFP01375 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TNFP01375 NPM1P4-201ENST00000414095 812 ntBASIC5.57□□□□□ -1.52
TNFP01375 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.57□□□□□ -1.52
TNFP01375 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.57□□□□□ -1.52
TNFP01375 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.57□□□□□ -1.52
TNFP01375 RPS3AP38-201ENST00000435889 763 ntBASIC5.57□□□□□ -1.52
TNFP01375 AL390879.1-201ENST00000439143 386 ntBASIC5.57□□□□□ -1.52
TNFP01375 AP000547.1-201ENST00000454360 617 ntBASIC5.57□□□□□ -1.52
TNFP01375 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.57□□□□□ -1.52
TNFP01375 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TNFP01375 RPS26P39-201ENST00000469206 341 ntBASIC5.57□□□□□ -1.52
TNFP01375 RN7SL184P-201ENST00000488308 297 ntBASIC5.57□□□□□ -1.52
TNFP01375 DUTP1-201ENST00000493631 470 ntBASIC5.57□□□□□ -1.52
TNFP01375 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
TNFP01375 IGLV2-28-201ENST00000520681 304 ntBASIC5.57□□□□□ -1.52
TNFP01375 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.57□□□□□ -1.52
TNFP01375 AP001804.1-201ENST00000526868 919 ntBASIC5.57□□□□□ -1.52
TNFP01375 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.57□□□□□ -1.52
TNFP01375 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFP01375 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.57□□□□□ -1.52
TNFP01375 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.57□□□□□ -1.52
TNFP01375 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.57□□□□□ -1.52
TNFP01375 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.57□□□□□ -1.52
TNFP01375 AGGF1P7-201ENST00000562369 913 ntBASIC5.57□□□□□ -1.52
TNFP01375 NPM1P45-201ENST00000583151 559 ntBASIC5.57□□□□□ -1.52
TNFP01375 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.57□□□□□ -1.52
TNFP01375 AL035661.1-201ENST00000620459 1144 ntBASIC5.57□□□□□ -1.52
TNFP01375 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
TNFP01375 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFP01375 AC097634.1-201ENST00000604491 2467 ntBASIC5.57□□□□□ -1.52
TNFP01375 MFSD8-239ENST00000641590 2479 ntBASIC5.57□□□□□ -1.52
TNFP01375 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.57□□□□□ -1.52
TNFP01375 Z83820.1-201ENST00000456978 1499 ntBASIC5.57□□□□□ -1.52
TNFP01375 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TNFP01375 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TNFP01375 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.57□□□□□ -1.52
TNFP01375 AC078880.4-201ENST00000617627 1749 ntBASIC5.57□□□□□ -1.52
TNFP01375 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.57□□□□□ -1.52
TNFP01375 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFP01375 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFP01375 LINC01963-201ENST00000562038 3148 ntBASIC5.57□□□□□ -1.52
TNFP01375 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.56□□□□□ -1.52
TNFP01375 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFP01375 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.56□□□□□ -1.52
TNFP01375 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFP01375 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFP01375 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TNFP01375 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFP01375 MIR130A-201ENST00000385274 89 ntBASIC5.56□□□□□ -1.52
TNFP01375 RN7SKP59-201ENST00000410520 314 ntBASIC5.56□□□□□ -1.52
TNFP01375 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.56□□□□□ -1.52
TNFP01375 AL450023.1-201ENST00000450868 751 ntBASIC5.56□□□□□ -1.52
TNFP01375 AC007386.1-201ENST00000455212 582 ntBASIC5.56□□□□□ -1.52
TNFP01375 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.56□□□□□ -1.52
TNFP01375 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.56□□□□□ -1.52
TNFP01375 RN7SL51P-201ENST00000468230 285 ntBASIC5.56□□□□□ -1.52
TNFP01375 AC100832.1-201ENST00000471945 383 ntBASIC5.56□□□□□ -1.52
TNFP01375 OR2AO1P-201ENST00000476497 403 ntBASIC5.56□□□□□ -1.52
TNFP01375 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.56□□□□□ -1.52
TNFP01375 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.56□□□□□ -1.52
TNFP01375 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.56□□□□□ -1.52
TNFP01375 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.56□□□□□ -1.52
TNFP01375 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.56□□□□□ -1.52
TNFP01375 snoU109.5-201ENST00000516231 132 ntBASIC5.56□□□□□ -1.52
TNFP01375 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.56□□□□□ -1.52
TNFP01375 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.56□□□□□ -1.52
TNFP01375 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.56□□□□□ -1.52
TNFP01375 AL513327.3-201ENST00000602618 469 ntBASIC5.56□□□□□ -1.52
TNFP01375 NANOGP3-201ENST00000605855 286 ntBASIC5.56□□□□□ -1.52
TNFP01375 AC010245.2-201ENST00000606908 1167 ntBASIC5.56□□□□□ -1.52
TNFP01375 AL133481.2-203ENST00000607558 139 ntBASIC5.56□□□□□ -1.52
TNFP01375 AC007204.2-201ENST00000615022 616 ntBASIC5.56□□□□□ -1.52
TNFP01375 AC132068.1-201ENST00000623805 459 ntBASIC5.56□□□□□ -1.52
TNFP01375 AC018659.2-201ENST00000624690 715 ntBASIC5.56□□□□□ -1.52
TNFP01375 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.56□□□□□ -1.52
TNFP01375 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.56□□□□□ -1.52
TNFP01375 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFP01375 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFP01375 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.56□□□□□ -1.52
TNFP01375 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.56□□□□□ -1.52
TNFP01375 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TNFP01375 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFP01375 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms