Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
PDGFBP01127 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFBP01127 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFBP01127 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
PDGFBP01127 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFBP01127 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFBP01127 RNA5SP319-201ENST00000362768 119 ntBASIC5.95□□□□□ -1.46
PDGFBP01127 RNU1-106P-201ENST00000384382 164 ntBASIC5.95□□□□□ -1.46
PDGFBP01127 AC007068.1-201ENST00000396690 844 ntBASIC5.95□□□□□ -1.46
PDGFBP01127 AC016397.1-201ENST00000412463 242 ntBASIC5.95□□□□□ -1.46
PDGFBP01127 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.95□□□□□ -1.46
PDGFBP01127 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.95□□□□□ -1.46
PDGFBP01127 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC5.95□□□□□ -1.46
PDGFBP01127 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.95□□□□□ -1.46
PDGFBP01127 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.95□□□□□ -1.46
PDGFBP01127 AC104164.1-201ENST00000460282 590 ntBASIC5.95□□□□□ -1.46
PDGFBP01127 AC006463.2-201ENST00000473326 348 ntBASIC5.95□□□□□ -1.46
PDGFBP01127 AC099521.1-201ENST00000482557 334 ntBASIC5.95□□□□□ -1.46
PDGFBP01127 AC007686.1-201ENST00000488511 463 ntBASIC5.95□□□□□ -1.46
PDGFBP01127 AC009120.1-201ENST00000493458 473 ntBASIC5.95□□□□□ -1.46
PDGFBP01127 SUMO2P4-201ENST00000504193 276 ntBASIC5.95□□□□□ -1.46
PDGFBP01127 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.95□□□□□ -1.46
PDGFBP01127 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.95□□□□□ -1.46
PDGFBP01127 AC021146.10-201ENST00000515628 706 ntBASIC5.95□□□□□ -1.46
PDGFBP01127 RNA5SP116-201ENST00000516132 98 ntBASIC5.95□□□□□ -1.46
PDGFBP01127 RNU6-943P-201ENST00000516960 98 ntBASIC5.95□□□□□ -1.46
PDGFBP01127 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.95□□□□□ -1.46
PDGFBP01127 KCTD9P6-201ENST00000522306 950 ntBASIC5.95□□□□□ -1.46
PDGFBP01127 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC5.95□□□□□ -1.46
PDGFBP01127 AL049779.2-201ENST00000553847 315 ntBASIC5.95□□□□□ -1.46
PDGFBP01127 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
PDGFBP01127 NPM1P5-201ENST00000557228 838 ntBASIC5.95□□□□□ -1.46
PDGFBP01127 RBM22P12-201ENST00000567098 1255 ntBASIC5.95□□□□□ -1.46
PDGFBP01127 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.95□□□□□ -1.46
PDGFBP01127 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.95□□□□□ -1.46
PDGFBP01127 AC096586.2-201ENST00000610260 441 ntBASIC5.95□□□□□ -1.46
PDGFBP01127 MIR378J-201ENST00000611988 109 ntBASIC5.95□□□□□ -1.46
PDGFBP01127 AL354950.1-201ENST00000614150 568 ntBASIC5.95□□□□□ -1.46
PDGFBP01127 uc_338.18-201ENST00000615451 175 ntBASIC5.95□□□□□ -1.46
PDGFBP01127 AC009120.7-201ENST00000623452 780 ntBASIC5.95□□□□□ -1.46
PDGFBP01127 AL390318.1-201ENST00000624564 687 ntBASIC5.95□□□□□ -1.46
PDGFBP01127 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFBP01127 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFBP01127 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFBP01127 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PDGFBP01127 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
PDGFBP01127 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
PDGFBP01127 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.94□□□□□ -1.46
PDGFBP01127 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC5.94□□□□□ -1.46
PDGFBP01127 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.94□□□□□ -1.46
PDGFBP01127 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDGFBP01127 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC5.94□□□□□ -1.46
PDGFBP01127 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PDGFBP01127 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
PDGFBP01127 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.94□□□□□ -1.46
PDGFBP01127 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDGFBP01127 GTF2IP4-201ENST00000453092 2054 ntBASIC5.94□□□□□ -1.46
PDGFBP01127 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PDGFBP01127 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PDGFBP01127 CLCA3P-203ENST00000490028 2781 ntBASIC5.94□□□□□ -1.46
PDGFBP01127 AL109941.1-201ENST00000401925 229 ntBASIC5.94□□□□□ -1.46
PDGFBP01127 OR2W4P-201ENST00000406496 926 ntBASIC5.94□□□□□ -1.46
PDGFBP01127 RAB28P1-201ENST00000411517 641 ntBASIC5.94□□□□□ -1.46
PDGFBP01127 RPS4XP5-201ENST00000419038 768 ntBASIC5.94□□□□□ -1.46
PDGFBP01127 AC008753.1-201ENST00000423096 284 ntBASIC5.94□□□□□ -1.46
PDGFBP01127 AL133173.1-201ENST00000423458 397 ntBASIC5.94□□□□□ -1.46
PDGFBP01127 AC113412.1-201ENST00000425840 504 ntBASIC5.94□□□□□ -1.46
PDGFBP01127 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.94□□□□□ -1.46
PDGFBP01127 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.94□□□□□ -1.46
PDGFBP01127 CYCSP6-201ENST00000434498 302 ntBASIC5.94□□□□□ -1.46
PDGFBP01127 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.94□□□□□ -1.46
PDGFBP01127 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.94□□□□□ -1.46
PDGFBP01127 CEACAMP9-201ENST00000442990 513 ntBASIC5.94□□□□□ -1.46
PDGFBP01127 DNAJB5P1-201ENST00000454004 806 ntBASIC5.94□□□□□ -1.46
PDGFBP01127 AC092824.1-201ENST00000483524 576 ntBASIC5.94□□□□□ -1.46
PDGFBP01127 RPL32P33-201ENST00000487023 394 ntBASIC5.94□□□□□ -1.46
PDGFBP01127 AC023818.1-201ENST00000498379 384 ntBASIC5.94□□□□□ -1.46
PDGFBP01127 RNA5SP400-201ENST00000517155 111 ntBASIC5.94□□□□□ -1.46
PDGFBP01127 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.94□□□□□ -1.46
PDGFBP01127 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC5.94□□□□□ -1.46
PDGFBP01127 TXNP4-201ENST00000575018 310 ntBASIC5.94□□□□□ -1.46
PDGFBP01127 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.94□□□□□ -1.46
PDGFBP01127 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.94□□□□□ -1.46
PDGFBP01127 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.94□□□□□ -1.46
PDGFBP01127 OR7A11P-201ENST00000597719 953 ntBASIC5.94□□□□□ -1.46
PDGFBP01127 uc_338.26-201ENST00000612659 160 ntBASIC5.94□□□□□ -1.46
PDGFBP01127 AL445528.2-201ENST00000620582 470 ntBASIC5.94□□□□□ -1.46
PDGFBP01127 AP003400.2-201ENST00000624036 666 ntBASIC5.94□□□□□ -1.46
PDGFBP01127 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.94□□□□□ -1.46
PDGFBP01127 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PDGFBP01127 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDGFBP01127 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDGFBP01127 CR382285.2-201ENST00000624662 1495 ntBASIC5.94□□□□□ -1.46
PDGFBP01127 AC105235.1-201ENST00000623208 1816 ntBASIC5.94□□□□□ -1.46
PDGFBP01127 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
PDGFBP01127 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDGFBP01127 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
PDGFBP01127 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.94□□□□□ -1.46
PDGFBP01127 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.94□□□□□ -1.46
PDGFBP01127 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms