Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMAD6O43541 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMAD6O43541 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
SMAD6O43541 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.98□□□□□ -1.45
SMAD6O43541 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SMAD6O43541 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
SMAD6O43541 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SMAD6O43541 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SMAD6O43541 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SMAD6O43541 AC083837.1-201ENST00000565297 2994 ntBASIC5.97□□□□□ -1.45
SMAD6O43541 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SMAD6O43541 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SMAD6O43541 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SMAD6O43541 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SMAD6O43541 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SMAD6O43541 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.97□□□□□ -1.45
SMAD6O43541 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SMAD6O43541 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SMAD6O43541 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.97□□□□□ -1.45
SMAD6O43541 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SMAD6O43541 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SMAD6O43541 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
SMAD6O43541 RN7SKP292-201ENST00000365522 317 ntBASIC5.97□□□□□ -1.45
SMAD6O43541 RNA5SP284-201ENST00000384547 118 ntBASIC5.97□□□□□ -1.45
SMAD6O43541 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SMAD6O43541 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SMAD6O43541 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.97□□□□□ -1.45
SMAD6O43541 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.97□□□□□ -1.45
SMAD6O43541 SFR1P2-201ENST00000421841 730 ntBASIC5.97□□□□□ -1.45
SMAD6O43541 OR5W1P-201ENST00000423705 938 ntBASIC5.97□□□□□ -1.45
SMAD6O43541 AC104843.2-201ENST00000427666 297 ntBASIC5.97□□□□□ -1.45
SMAD6O43541 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.97□□□□□ -1.45
SMAD6O43541 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.97□□□□□ -1.45
SMAD6O43541 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.97□□□□□ -1.45
SMAD6O43541 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.97□□□□□ -1.45
SMAD6O43541 AL445687.2-201ENST00000458156 728 ntBASIC5.97□□□□□ -1.45
SMAD6O43541 AL603882.1-201ENST00000463059 681 ntBASIC5.97□□□□□ -1.45
SMAD6O43541 PFN1P6-201ENST00000476786 399 ntBASIC5.97□□□□□ -1.45
SMAD6O43541 RPL38P3-201ENST00000484463 213 ntBASIC5.97□□□□□ -1.45
SMAD6O43541 CR383656.1-201ENST00000484916 377 ntBASIC5.97□□□□□ -1.45
SMAD6O43541 AC026782.2-201ENST00000510845 636 ntBASIC5.97□□□□□ -1.45
SMAD6O43541 ASNSP4-201ENST00000511103 447 ntBASIC5.97□□□□□ -1.45
SMAD6O43541 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.97□□□□□ -1.45
SMAD6O43541 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.97□□□□□ -1.45
SMAD6O43541 AC008429.4-201ENST00000521201 182 ntBASIC5.97□□□□□ -1.45
SMAD6O43541 AP003080.1-202ENST00000526526 915 ntBASIC5.97□□□□□ -1.45
SMAD6O43541 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.97□□□□□ -1.45
SMAD6O43541 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.97□□□□□ -1.45
SMAD6O43541 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SMAD6O43541 AC244502.2-201ENST00000543361 851 ntBASIC5.97□□□□□ -1.45
SMAD6O43541 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.97□□□□□ -1.45
SMAD6O43541 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.97□□□□□ -1.45
SMAD6O43541 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.97□□□□□ -1.45
SMAD6O43541 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.97□□□□□ -1.45
SMAD6O43541 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
SMAD6O43541 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SMAD6O43541 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.97□□□□□ -1.45
SMAD6O43541 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.97□□□□□ -1.45
SMAD6O43541 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.97□□□□□ -1.45
SMAD6O43541 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.97□□□□□ -1.45
SMAD6O43541 AL139022.2-201ENST00000606934 443 ntBASIC5.97□□□□□ -1.45
SMAD6O43541 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.97□□□□□ -1.45
SMAD6O43541 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.97□□□□□ -1.45
SMAD6O43541 AC097520.1-201ENST00000624435 385 ntBASIC5.97□□□□□ -1.45
SMAD6O43541 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.97□□□□□ -1.45
SMAD6O43541 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SMAD6O43541 MTCO1P7-201ENST00000419523 1542 ntBASIC5.97□□□□□ -1.45
SMAD6O43541 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SMAD6O43541 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SMAD6O43541 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SMAD6O43541 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SMAD6O43541 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.97□□□□□ -1.45
SMAD6O43541 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SMAD6O43541 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SMAD6O43541 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SMAD6O43541 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SMAD6O43541 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.45
SMAD6O43541 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SMAD6O43541 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.96□□□□□ -1.45
SMAD6O43541 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SMAD6O43541 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.96□□□□□ -1.45
SMAD6O43541 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
SMAD6O43541 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.96□□□□□ -1.45
SMAD6O43541 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SMAD6O43541 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SMAD6O43541 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SMAD6O43541 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SMAD6O43541 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SMAD6O43541 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SMAD6O43541 OR7E101P-201ENST00000400428 513 ntBASIC5.96□□□□□ -1.46
SMAD6O43541 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SMAD6O43541 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SMAD6O43541 AL136455.1-201ENST00000441083 1240 ntBASIC5.96□□□□□ -1.46
SMAD6O43541 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.96□□□□□ -1.46
SMAD6O43541 REG1CP-206ENST00000447469 496 ntBASIC5.96□□□□□ -1.46
SMAD6O43541 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.96□□□□□ -1.46
SMAD6O43541 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.96□□□□□ -1.46
SMAD6O43541 AL513343.1-201ENST00000451818 792 ntBASIC5.96□□□□□ -1.46
SMAD6O43541 MTND3P4-201ENST00000453537 303 ntBASIC5.96□□□□□ -1.46
SMAD6O43541 SETP20-201ENST00000457046 852 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms