Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.48□□□□□ -1.37
FOXN3O00409 RPL7AP14-201ENST00000424041 802 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.48□□□□□ -1.37
FOXN3O00409 CUBNP2-201ENST00000443534 1139 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 AL627224.1-201ENST00000448334 444 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 AC002553.3-201ENST00000453002 341 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 SDC4P-201ENST00000453285 601 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.48□□□□□ -1.37
FOXN3O00409 ACA64.4-201ENST00000459070 127 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 RN7SL836P-201ENST00000476140 296 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.48□□□□□ -1.37
FOXN3O00409 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.48□□□□□ -1.37
FOXN3O00409 OR7E99P-201ENST00000505750 922 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.48□□□□□ -1.37
FOXN3O00409 RN7SKP67-201ENST00000515905 235 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 RNA5SP441-201ENST00000516809 88 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
FOXN3O00409 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.48□□□□□ -1.37
FOXN3O00409 AL049779.3-201ENST00000557141 606 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.48□□□□□ -1.37
FOXN3O00409 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.48□□□□□ -1.37
FOXN3O00409 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.48□□□□□ -1.37
FOXN3O00409 AC104072.1-201ENST00000568817 668 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.48□□□□□ -1.37
FOXN3O00409 AL078601.3-201ENST00000573303 535 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 OR1E3-201ENST00000575608 948 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.48□□□□□ -1.37
FOXN3O00409 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.48□□□□□ -1.37
FOXN3O00409 AC135178.6-201ENST00000605314 398 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 AL391834.1-201ENST00000609609 560 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.48□□□□□ -1.37
FOXN3O00409 AL357562.1-201ENST00000624911 609 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
FOXN3O00409 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.48□□□□□ -1.37
FOXN3O00409 AC017002.4-201ENST00000604721 1525 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.48□□□□□ -1.37
FOXN3O00409 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.48□□□□□ -1.37
FOXN3O00409 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
FOXN3O00409 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
FOXN3O00409 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
FOXN3O00409 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
FOXN3O00409 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.48□□□□□ -1.37
FOXN3O00409 AC027575.3-201ENST00000583058 2747 ntBASIC6.48□□□□□ -1.37
FOXN3O00409 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
FOXN3O00409 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.48□□□□□ -1.37
FOXN3O00409 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
FOXN3O00409 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
FOXN3O00409 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
FOXN3O00409 SAMM50P1-201ENST00000455403 1399 ntBASIC6.47□□□□□ -1.37
FOXN3O00409 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.47□□□□□ -1.37
FOXN3O00409 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.47□□□□□ -1.37
FOXN3O00409 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
FOXN3O00409 AC011503.2-201ENST00000594230 1500 ntBASIC6.47□□□□□ -1.37
FOXN3O00409 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
FOXN3O00409 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
FOXN3O00409 RN7SKP250-201ENST00000363924 321 ntBASIC6.47□□□□□ -1.37
FOXN3O00409 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.47□□□□□ -1.37
FOXN3O00409 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.47□□□□□ -1.37
FOXN3O00409 RANP4-201ENST00000413361 655 ntBASIC6.47□□□□□ -1.37
FOXN3O00409 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.47□□□□□ -1.37
FOXN3O00409 AL359885.1-201ENST00000415786 903 ntBASIC6.47□□□□□ -1.37
FOXN3O00409 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.47□□□□□ -1.37
FOXN3O00409 AL034379.1-201ENST00000423216 253 ntBASIC6.47□□□□□ -1.37
FOXN3O00409 HSFY1P1-201ENST00000423928 1178 ntBASIC6.47□□□□□ -1.37
FOXN3O00409 AC108479.1-201ENST00000431142 427 ntBASIC6.47□□□□□ -1.37
FOXN3O00409 AC023141.3-201ENST00000436698 278 ntBASIC6.47□□□□□ -1.37
FOXN3O00409 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.47□□□□□ -1.37
FOXN3O00409 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.47□□□□□ -1.37
FOXN3O00409 AC078857.1-201ENST00000469870 667 ntBASIC6.47□□□□□ -1.37
FOXN3O00409 AC044810.1-201ENST00000480271 711 ntBASIC6.47□□□□□ -1.37
FOXN3O00409 RN7SL362P-201ENST00000494228 267 ntBASIC6.47□□□□□ -1.37
FOXN3O00409 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.47□□□□□ -1.37
FOXN3O00409 AC026782.2-201ENST00000510845 636 ntBASIC6.47□□□□□ -1.37
FOXN3O00409 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.47□□□□□ -1.37
FOXN3O00409 SNORA76.2-201ENST00000517095 137 ntBASIC6.47□□□□□ -1.37
FOXN3O00409 OR4A41P-201ENST00000533053 928 ntBASIC6.47□□□□□ -1.37
FOXN3O00409 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
FOXN3O00409 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.47□□□□□ -1.37
FOXN3O00409 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.47□□□□□ -1.37
FOXN3O00409 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
FOXN3O00409 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
FOXN3O00409 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.47□□□□□ -1.37
FOXN3O00409 LINC00556-201ENST00000569603 412 ntBASIC6.47□□□□□ -1.37
FOXN3O00409 AC027216.1-201ENST00000577726 685 ntBASIC6.47□□□□□ -1.37
FOXN3O00409 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.47□□□□□ -1.37
FOXN3O00409 AL645933.2-201ENST00000606743 1207 ntBASIC6.47□□□□□ -1.37
FOXN3O00409 AC242628.1-201ENST00000606810 391 ntBASIC6.47□□□□□ -1.37
FOXN3O00409 uc_338.26-201ENST00000612659 160 ntBASIC6.47□□□□□ -1.37
FOXN3O00409 MIR6721-201ENST00000617181 87 ntBASIC6.47□□□□□ -1.37
FOXN3O00409 AL163051.2-201ENST00000618976 735 ntBASIC6.47□□□□□ -1.37
FOXN3O00409 AC073869.7-201ENST00000640874 297 ntBASIC6.47□□□□□ -1.37
FOXN3O00409 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
FOXN3O00409 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.47□□□□□ -1.37
FOXN3O00409 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
FOXN3O00409 AP001284.1-201ENST00000528393 2118 ntBASIC6.47□□□□□ -1.37
FOXN3O00409 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
FOXN3O00409 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
FOXN3O00409 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
FOXN3O00409 AC007842.1-201ENST00000597336 2039 ntBASIC6.47□□□□□ -1.37
FOXN3O00409 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms