Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.19□□□□□ -1.42
O00370 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
O00370 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
O00370 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.19□□□□□ -1.42
O00370 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
O00370 CASC19-255ENST00000641733 1385 ntBASIC6.18□□□□□ -1.42
O00370 MFSD8-219ENST00000641228 2559 ntBASIC6.18□□□□□ -1.42
O00370 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
O00370 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
O00370 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
O00370 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
O00370 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.18□□□□□ -1.42
O00370 SYT14P1-202ENST00000600441 1448 ntBASIC6.18□□□□□ -1.42
O00370 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
O00370 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
O00370 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
O00370 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
O00370 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.18□□□□□ -1.42
O00370 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
O00370 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
O00370 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
O00370 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
O00370 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
O00370 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.18□□□□□ -1.42
O00370 AL512637.1-201ENST00000439523 1231 ntBASIC6.18□□□□□ -1.42
O00370 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.18□□□□□ -1.42
O00370 AC079080.1-201ENST00000479841 822 ntBASIC6.18□□□□□ -1.42
O00370 AC099521.1-201ENST00000482557 334 ntBASIC6.18□□□□□ -1.42
O00370 HMGB3P14-201ENST00000494195 599 ntBASIC6.18□□□□□ -1.42
O00370 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
O00370 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.18□□□□□ -1.42
O00370 MTCO3P42-201ENST00000509488 518 ntBASIC6.18□□□□□ -1.42
O00370 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.18□□□□□ -1.42
O00370 MTCO3P39-201ENST00000514812 518 ntBASIC6.18□□□□□ -1.42
O00370 RNA5SP271-201ENST00000516700 88 ntBASIC6.18□□□□□ -1.42
O00370 OR8Q1P-201ENST00000526467 655 ntBASIC6.18□□□□□ -1.42
O00370 HMGN2P36-201ENST00000529541 409 ntBASIC6.18□□□□□ -1.42
O00370 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
O00370 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.18□□□□□ -1.42
O00370 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
O00370 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.18□□□□□ -1.42
O00370 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.18□□□□□ -1.42
O00370 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.18□□□□□ -1.42
O00370 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
O00370 COX6CP7-201ENST00000597056 208 ntBASIC6.18□□□□□ -1.42
O00370 AL365181.4-201ENST00000609800 547 ntBASIC6.18□□□□□ -1.42
O00370 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.18□□□□□ -1.42
O00370 AC022919.1-201ENST00000624979 626 ntBASIC6.18□□□□□ -1.42
O00370 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.18□□□□□ -1.42
O00370 AC079776.5-201ENST00000641920 211 ntBASIC6.18□□□□□ -1.42
O00370 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
O00370 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
O00370 AC109446.4-201ENST00000623235 2755 ntBASIC6.18□□□□□ -1.42
O00370 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
O00370 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
O00370 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
O00370 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
O00370 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.18□□□□□ -1.42
O00370 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
O00370 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
O00370 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
O00370 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
O00370 ADAM24P-201ENST00000398655 2101 ntBASIC6.17□□□□□ -1.42
O00370 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
O00370 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.17□□□□□ -1.42
O00370 MFSD8-239ENST00000641590 2479 ntBASIC6.17□□□□□ -1.42
O00370 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
O00370 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
O00370 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
O00370 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.17□□□□□ -1.42
O00370 U3.23-201ENST00000391132 200 ntBASIC6.17□□□□□ -1.42
O00370 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.17□□□□□ -1.42
O00370 AC013268.2-201ENST00000420753 337 ntBASIC6.17□□□□□ -1.42
O00370 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
O00370 AC126120.1-201ENST00000431082 470 ntBASIC6.17□□□□□ -1.42
O00370 GAPDHP48-201ENST00000436626 961 ntBASIC6.17□□□□□ -1.42
O00370 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.17□□□□□ -1.42
O00370 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.17□□□□□ -1.42
O00370 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
O00370 EIF5AP4-201ENST00000441206 465 ntBASIC6.17□□□□□ -1.42
O00370 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.17□□□□□ -1.42
O00370 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.17□□□□□ -1.42
O00370 RSU1P1-201ENST00000453416 441 ntBASIC6.17□□□□□ -1.42
O00370 FRG2FP-204ENST00000453982 852 ntBASIC6.17□□□□□ -1.42
O00370 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
O00370 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC6.17□□□□□ -1.42
O00370 ACA64.1-201ENST00000459171 127 ntBASIC6.17□□□□□ -1.42
O00370 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
O00370 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.17□□□□□ -1.42
O00370 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
O00370 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.17□□□□□ -1.42
O00370 AC092121.1-201ENST00000569452 202 ntBASIC6.17□□□□□ -1.42
O00370 AL096712.1-201ENST00000614561 159 ntBASIC6.17□□□□□ -1.42
O00370 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.17□□□□□ -1.42
O00370 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
O00370 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
O00370 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
O00370 AC004076.2-201ENST00000620532 3323 ntBASIC6.17□□□□□ -1.42
O00370 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
O00370 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms